Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDKL1Q00532 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDKL1Q00532 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDKL1Q00532 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDKL1Q00532 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.53■□□□□ 0.4
CDKL1Q00532 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.53■□□□□ 0.4
CDKL1Q00532 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.53■□□□□ 0.4
CDKL1Q00532 AC104076.2-201ENST00000448912 469 ntBASIC17.53■□□□□ 0.4
CDKL1Q00532 AC063952.2-201ENST00000498792 1227 ntBASIC17.53■□□□□ 0.4
CDKL1Q00532 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.53■□□□□ 0.4
CDKL1Q00532 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.53■□□□□ 0.4
CDKL1Q00532 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.53■□□□□ 0.4
CDKL1Q00532 HYMAI.1-201ENST00000620949 238 ntBASIC17.53■□□□□ 0.4
CDKL1Q00532 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.53■□□□□ 0.4
CDKL1Q00532 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
CDKL1Q00532 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CDKL1Q00532 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.53■□□□□ 0.4
CDKL1Q00532 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDKL1Q00532 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDKL1Q00532 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.52■□□□□ 0.4
CDKL1Q00532 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDKL1Q00532 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
CDKL1Q00532 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.52■□□□□ 0.4
CDKL1Q00532 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.52■□□□□ 0.4
CDKL1Q00532 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDKL1Q00532 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.52■□□□□ 0.4
CDKL1Q00532 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CDKL1Q00532 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CDKL1Q00532 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDKL1Q00532 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDKL1Q00532 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDKL1Q00532 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDKL1Q00532 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.52■□□□□ 0.4
CDKL1Q00532 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDKL1Q00532 IGHGP-201ENST00000390555 1178 ntBASIC17.52■□□□□ 0.4
CDKL1Q00532 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDKL1Q00532 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.52■□□□□ 0.4
CDKL1Q00532 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.52■□□□□ 0.4
CDKL1Q00532 AC112907.2-201ENST00000448639 330 ntBASIC17.52■□□□□ 0.4
CDKL1Q00532 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.52■□□□□ 0.4
CDKL1Q00532 AC092647.4-201ENST00000457211 535 ntBASIC17.52■□□□□ 0.4
CDKL1Q00532 AL359075.1-203ENST00000462729 1002 ntBASIC17.52■□□□□ 0.4
CDKL1Q00532 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.52■□□□□ 0.4
CDKL1Q00532 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.52■□□□□ 0.4
CDKL1Q00532 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.52■□□□□ 0.4
CDKL1Q00532 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.52■□□□□ 0.4
CDKL1Q00532 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.52■□□□□ 0.4
CDKL1Q00532 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.52■□□□□ 0.4
CDKL1Q00532 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.52■□□□□ 0.4
CDKL1Q00532 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.52■□□□□ 0.4
CDKL1Q00532 AC009154.2-201ENST00000621177 724 ntBASIC17.52■□□□□ 0.4
CDKL1Q00532 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CDKL1Q00532 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CDKL1Q00532 AC090340.1-201ENST00000620778 4980 ntBASIC17.52■□□□□ 0.4
CDKL1Q00532 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDKL1Q00532 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDKL1Q00532 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.52■□□□□ 0.39
CDKL1Q00532 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
CDKL1Q00532 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.39
CDKL1Q00532 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
CDKL1Q00532 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDKL1Q00532 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
CDKL1Q00532 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDKL1Q00532 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.51■□□□□ 0.39
CDKL1Q00532 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.51■□□□□ 0.39
CDKL1Q00532 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CDKL1Q00532 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDKL1Q00532 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDKL1Q00532 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDKL1Q00532 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDKL1Q00532 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDKL1Q00532 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CDKL1Q00532 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDKL1Q00532 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDKL1Q00532 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDKL1Q00532 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDKL1Q00532 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDKL1Q00532 RCN1P1-201ENST00000400413 996 ntBASIC17.51■□□□□ 0.39
CDKL1Q00532 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.51■□□□□ 0.39
CDKL1Q00532 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDKL1Q00532 AP003733.1-201ENST00000491725 852 ntBASIC17.51■□□□□ 0.39
CDKL1Q00532 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.51■□□□□ 0.39
CDKL1Q00532 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDKL1Q00532 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CDKL1Q00532 ZNF444P1-201ENST00000559497 298 ntBASIC17.51■□□□□ 0.39
CDKL1Q00532 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.51■□□□□ 0.39
CDKL1Q00532 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
CDKL1Q00532 AC004263.2-201ENST00000617183 678 ntBASIC17.51■□□□□ 0.39
CDKL1Q00532 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CDKL1Q00532 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDKL1Q00532 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.51■□□□□ 0.39
CDKL1Q00532 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDKL1Q00532 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CDKL1Q00532 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDKL1Q00532 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CDKL1Q00532 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDKL1Q00532 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDKL1Q00532 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CDKL1Q00532 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDKL1Q00532 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms