Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDK3Q00526 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.47■□□□□ 0.39
CDK3Q00526 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.47■□□□□ 0.39
CDK3Q00526 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDK3Q00526 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDK3Q00526 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDK3Q00526 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.47■□□□□ 0.39
CDK3Q00526 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.47■□□□□ 0.39
CDK3Q00526 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
CDK3Q00526 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.47■□□□□ 0.39
CDK3Q00526 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.47■□□□□ 0.39
CDK3Q00526 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDK3Q00526 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CDK3Q00526 AC064862.7-201ENST00000604520 867 ntBASIC17.47■□□□□ 0.39
CDK3Q00526 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CDK3Q00526 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.47■□□□□ 0.39
CDK3Q00526 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.47■□□□□ 0.39
CDK3Q00526 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.47■□□□□ 0.39
CDK3Q00526 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.47■□□□□ 0.39
CDK3Q00526 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDK3Q00526 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CDK3Q00526 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CDK3Q00526 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDK3Q00526 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDK3Q00526 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.47■□□□□ 0.39
CDK3Q00526 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDK3Q00526 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDK3Q00526 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDK3Q00526 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CDK3Q00526 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CDK3Q00526 PMPCAP1-201ENST00000508114 1576 ntBASIC17.46■□□□□ 0.39
CDK3Q00526 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.46■□□□□ 0.39
CDK3Q00526 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDK3Q00526 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CDK3Q00526 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDK3Q00526 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDK3Q00526 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDK3Q00526 KRT18P67-201ENST00000432816 1264 ntBASIC17.46■□□□□ 0.39
CDK3Q00526 AF186996.4-201ENST00000467186 377 ntBASIC17.46■□□□□ 0.39
CDK3Q00526 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.46■□□□□ 0.39
CDK3Q00526 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.46■□□□□ 0.39
CDK3Q00526 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.46■□□□□ 0.39
CDK3Q00526 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.46■□□□□ 0.39
CDK3Q00526 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDK3Q00526 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.46■□□□□ 0.39
CDK3Q00526 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDK3Q00526 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CDK3Q00526 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CDK3Q00526 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.46■□□□□ 0.39
CDK3Q00526 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.46■□□□□ 0.39
CDK3Q00526 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.38
CDK3Q00526 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.45■□□□□ 0.38
CDK3Q00526 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDK3Q00526 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDK3Q00526 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.45■□□□□ 0.38
CDK3Q00526 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.45■□□□□ 0.38
CDK3Q00526 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.45■□□□□ 0.38
CDK3Q00526 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDK3Q00526 AL356309.3-201ENST00000624132 1934 ntBASIC17.45■□□□□ 0.38
CDK3Q00526 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDK3Q00526 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDK3Q00526 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CDK3Q00526 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDK3Q00526 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDK3Q00526 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDK3Q00526 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDK3Q00526 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDK3Q00526 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.45■□□□□ 0.38
CDK3Q00526 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDK3Q00526 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDK3Q00526 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.45■□□□□ 0.38
CDK3Q00526 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.45■□□□□ 0.38
CDK3Q00526 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDK3Q00526 SART3-203ENST00000546611 1184 ntBASIC17.45■□□□□ 0.38
CDK3Q00526 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.45■□□□□ 0.38
CDK3Q00526 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDK3Q00526 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.45■□□□□ 0.38
CDK3Q00526 AL139288.1-201ENST00000623748 933 ntBASIC17.45■□□□□ 0.38
CDK3Q00526 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.45■□□□□ 0.38
CDK3Q00526 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.45■□□□□ 0.38
CDK3Q00526 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDK3Q00526 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDK3Q00526 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDK3Q00526 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.45■□□□□ 0.38
CDK3Q00526 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.45■□□□□ 0.38
CDK3Q00526 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.45■□□□□ 0.38
CDK3Q00526 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.45■□□□□ 0.38
CDK3Q00526 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDK3Q00526 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDK3Q00526 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.45■□□□□ 0.38
CDK3Q00526 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDK3Q00526 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDK3Q00526 AL049757.1-201ENST00000616842 1596 ntBASIC17.45■□□□□ 0.38
CDK3Q00526 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDK3Q00526 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDK3Q00526 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CDK3Q00526 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
CDK3Q00526 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDK3Q00526 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDK3Q00526 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms