Protein–RNA interactions for Protein: P98155

VLDLR, Very low-density lipoprotein receptor, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLRP98155 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VLDLRP98155 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
VLDLRP98155 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VLDLRP98155 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
VLDLRP98155 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
VLDLRP98155 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VLDLRP98155 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VLDLRP98155 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
VLDLRP98155 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.65■□□□□ 0.26
VLDLRP98155 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VLDLRP98155 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VLDLRP98155 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.65■□□□□ 0.26
VLDLRP98155 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
VLDLRP98155 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
VLDLRP98155 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.65■□□□□ 0.26
VLDLRP98155 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VLDLRP98155 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.65■□□□□ 0.26
VLDLRP98155 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
VLDLRP98155 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
VLDLRP98155 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.65■□□□□ 0.26
VLDLRP98155 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
VLDLRP98155 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
VLDLRP98155 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VLDLRP98155 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
VLDLRP98155 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.64■□□□□ 0.25
VLDLRP98155 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
VLDLRP98155 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VLDLRP98155 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VLDLRP98155 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
VLDLRP98155 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
VLDLRP98155 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
VLDLRP98155 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VLDLRP98155 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VLDLRP98155 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VLDLRP98155 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
VLDLRP98155 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VLDLRP98155 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.64■□□□□ 0.25
VLDLRP98155 SLC25A1P2-201ENST00000430693 912 ntBASIC16.64■□□□□ 0.25
VLDLRP98155 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.64■□□□□ 0.25
VLDLRP98155 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.64■□□□□ 0.25
VLDLRP98155 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.64■□□□□ 0.25
VLDLRP98155 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.64■□□□□ 0.25
VLDLRP98155 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.64■□□□□ 0.25
VLDLRP98155 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VLDLRP98155 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VLDLRP98155 AL445228.2-201ENST00000605589 952 ntBASIC16.64■□□□□ 0.25
VLDLRP98155 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
VLDLRP98155 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
VLDLRP98155 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VLDLRP98155 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VLDLRP98155 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
VLDLRP98155 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
VLDLRP98155 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VLDLRP98155 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.64■□□□□ 0.25
VLDLRP98155 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.64■□□□□ 0.25
VLDLRP98155 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
VLDLRP98155 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VLDLRP98155 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VLDLRP98155 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VLDLRP98155 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VLDLRP98155 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
VLDLRP98155 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VLDLRP98155 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VLDLRP98155 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
VLDLRP98155 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.64■□□□□ 0.25
VLDLRP98155 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VLDLRP98155 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VLDLRP98155 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
VLDLRP98155 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.63■□□□□ 0.25
VLDLRP98155 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
VLDLRP98155 HLA-J-201ENST00000462773 1622 ntBASIC16.63■□□□□ 0.25
VLDLRP98155 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
VLDLRP98155 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
VLDLRP98155 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
VLDLRP98155 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
VLDLRP98155 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
VLDLRP98155 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.63■□□□□ 0.25
VLDLRP98155 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
VLDLRP98155 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VLDLRP98155 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VLDLRP98155 RN7SL850P-201ENST00000579959 291 ntBASIC16.63■□□□□ 0.25
VLDLRP98155 AC010240.3-201ENST00000607688 395 ntBASIC16.63■□□□□ 0.25
VLDLRP98155 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.63■□□□□ 0.25
VLDLRP98155 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
VLDLRP98155 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.63■□□□□ 0.25
VLDLRP98155 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VLDLRP98155 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
VLDLRP98155 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VLDLRP98155 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VLDLRP98155 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VLDLRP98155 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
VLDLRP98155 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
VLDLRP98155 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VLDLRP98155 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.62■□□□□ 0.25
VLDLRP98155 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.62■□□□□ 0.25
VLDLRP98155 AC092338.2-201ENST00000568827 1415 ntBASIC16.62■□□□□ 0.25
VLDLRP98155 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VLDLRP98155 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
VLDLRP98155 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VLDLRP98155 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms