Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NKX6-1P78426 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.69■□□□□ 0.1
NKX6-1P78426 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NKX6-1P78426 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC15.69■□□□□ 0.1
NKX6-1P78426 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
NKX6-1P78426 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
NKX6-1P78426 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
NKX6-1P78426 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
NKX6-1P78426 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NKX6-1P78426 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
NKX6-1P78426 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
NKX6-1P78426 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NKX6-1P78426 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC15.68■□□□□ 0.1
NKX6-1P78426 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NKX6-1P78426 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
NKX6-1P78426 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.68■□□□□ 0.1
NKX6-1P78426 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC15.68■□□□□ 0.1
NKX6-1P78426 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NKX6-1P78426 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC15.68■□□□□ 0.1
NKX6-1P78426 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
NKX6-1P78426 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NKX6-1P78426 MIR574-201ENST00000385209 96 ntBASIC15.68■□□□□ 0.1
NKX6-1P78426 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
NKX6-1P78426 TSPY12P-201ENST00000421279 868 ntBASIC15.68■□□□□ 0.1
NKX6-1P78426 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
NKX6-1P78426 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NKX6-1P78426 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.68■□□□□ 0.1
NKX6-1P78426 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
NKX6-1P78426 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.68■□□□□ 0.1
NKX6-1P78426 GUSBP12-201ENST00000513727 720 ntBASIC15.68■□□□□ 0.1
NKX6-1P78426 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
NKX6-1P78426 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.68■□□□□ 0.1
NKX6-1P78426 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.68■□□□□ 0.1
NKX6-1P78426 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.68■□□□□ 0.1
NKX6-1P78426 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
NKX6-1P78426 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC15.68■□□□□ 0.1
NKX6-1P78426 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
NKX6-1P78426 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NKX6-1P78426 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NKX6-1P78426 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NKX6-1P78426 LINC01126-201ENST00000623515 1646 ntBASIC15.68■□□□□ 0.1
NKX6-1P78426 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NKX6-1P78426 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NKX6-1P78426 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NKX6-1P78426 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC15.68■□□□□ 0.1
NKX6-1P78426 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC15.67■□□□□ 0.1
NKX6-1P78426 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NKX6-1P78426 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX6-1P78426 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX6-1P78426 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
NKX6-1P78426 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX6-1P78426 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX6-1P78426 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX6-1P78426 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
NKX6-1P78426 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX6-1P78426 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX6-1P78426 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC15.67■□□□□ 0.1
NKX6-1P78426 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NKX6-1P78426 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX6-1P78426 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
NKX6-1P78426 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC15.67■□□□□ 0.1
NKX6-1P78426 AL353692.3-201ENST00000407031 1396 ntBASIC15.67■□□□□ 0.1
NKX6-1P78426 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.67■□□□□ 0.1
NKX6-1P78426 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX6-1P78426 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NKX6-1P78426 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX6-1P78426 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.67■□□□□ 0.1
NKX6-1P78426 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
NKX6-1P78426 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.67■□□□□ 0.1
NKX6-1P78426 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.67■□□□□ 0.1
NKX6-1P78426 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.67■□□□□ 0.1
NKX6-1P78426 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.67■□□□□ 0.1
NKX6-1P78426 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.67■□□□□ 0.1
NKX6-1P78426 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
NKX6-1P78426 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.67■□□□□ 0.1
NKX6-1P78426 AC124864.1-201ENST00000623408 392 ntBASIC15.67■□□□□ 0.1
NKX6-1P78426 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.67■□□□□ 0.1
NKX6-1P78426 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX6-1P78426 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX6-1P78426 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX6-1P78426 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX6-1P78426 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX6-1P78426 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
NKX6-1P78426 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX6-1P78426 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX6-1P78426 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX6-1P78426 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX6-1P78426 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
NKX6-1P78426 IL9RP2-201ENST00000423948 1312 ntBASIC15.67■□□□□ 0.1
NKX6-1P78426 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX6-1P78426 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.67■□□□□ 0.1
NKX6-1P78426 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX6-1P78426 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NKX6-1P78426 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NKX6-1P78426 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC15.66■□□□□ 0.1
NKX6-1P78426 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NKX6-1P78426 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
NKX6-1P78426 AL138781.2-201ENST00000617896 1843 ntBASIC15.66■□□□□ 0.1
NKX6-1P78426 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.66■□□□□ 0.1
NKX6-1P78426 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms