Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAE1P78406 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAE1P78406 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAE1P78406 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.86■□□□□ 0.29
RAE1P78406 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RAE1P78406 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RAE1P78406 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAE1P78406 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RAE1P78406 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.86■□□□□ 0.29
RAE1P78406 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
RAE1P78406 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.86■□□□□ 0.29
RAE1P78406 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.86■□□□□ 0.29
RAE1P78406 TSPY22P-201ENST00000427496 604 ntBASIC16.86■□□□□ 0.29
RAE1P78406 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.86■□□□□ 0.29
RAE1P78406 KRT18P21-201ENST00000515767 1272 ntBASIC16.86■□□□□ 0.29
RAE1P78406 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RAE1P78406 AL136038.3-201ENST00000561909 1096 ntBASIC16.86■□□□□ 0.29
RAE1P78406 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.86■□□□□ 0.29
RAE1P78406 LINC01238-205ENST00000567549 1107 ntBASIC16.86■□□□□ 0.29
RAE1P78406 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RAE1P78406 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAE1P78406 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
RAE1P78406 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.86■□□□□ 0.29
RAE1P78406 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.86■□□□□ 0.29
RAE1P78406 AC012313.1-201ENST00000593393 3059 ntBASIC16.86■□□□□ 0.29
RAE1P78406 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAE1P78406 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAE1P78406 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAE1P78406 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAE1P78406 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAE1P78406 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RAE1P78406 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAE1P78406 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.85■□□□□ 0.29
RAE1P78406 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RAE1P78406 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAE1P78406 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.85■□□□□ 0.29
RAE1P78406 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RAE1P78406 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RAE1P78406 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAE1P78406 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAE1P78406 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.85■□□□□ 0.29
RAE1P78406 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.85■□□□□ 0.29
RAE1P78406 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAE1P78406 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RAE1P78406 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAE1P78406 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAE1P78406 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAE1P78406 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RAE1P78406 AL031133.1-201ENST00000406807 723 ntBASIC16.85■□□□□ 0.29
RAE1P78406 AL845331.1-201ENST00000424978 1190 ntBASIC16.85■□□□□ 0.29
RAE1P78406 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.85■□□□□ 0.29
RAE1P78406 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.85■□□□□ 0.29
RAE1P78406 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RAE1P78406 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.85■□□□□ 0.29
RAE1P78406 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.85■□□□□ 0.29
RAE1P78406 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RAE1P78406 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAE1P78406 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAE1P78406 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
RAE1P78406 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAE1P78406 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAE1P78406 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAE1P78406 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAE1P78406 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RAE1P78406 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RAE1P78406 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAE1P78406 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAE1P78406 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAE1P78406 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.84■□□□□ 0.29
RAE1P78406 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAE1P78406 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAE1P78406 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RAE1P78406 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.84■□□□□ 0.29
RAE1P78406 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAE1P78406 AP001094.4-201ENST00000579008 2176 ntBASIC16.84■□□□□ 0.29
RAE1P78406 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RAE1P78406 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RAE1P78406 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.84■□□□□ 0.29
RAE1P78406 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAE1P78406 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.84■□□□□ 0.29
RAE1P78406 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.84■□□□□ 0.29
RAE1P78406 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
RAE1P78406 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.84■□□□□ 0.29
RAE1P78406 AC011498.5-201ENST00000592027 486 ntBASIC16.84■□□□□ 0.29
RAE1P78406 AL353801.3-201ENST00000609898 542 ntBASIC16.84■□□□□ 0.29
RAE1P78406 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.84■□□□□ 0.29
RAE1P78406 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
RAE1P78406 AC097374.2-201ENST00000618617 1306 ntBASIC16.84■□□□□ 0.29
RAE1P78406 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.84■□□□□ 0.29
RAE1P78406 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.84■□□□□ 0.29
RAE1P78406 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAE1P78406 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAE1P78406 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAE1P78406 LYSMD4-203ENST00000378904 2122 ntBASIC16.84■□□□□ 0.29
RAE1P78406 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RAE1P78406 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.84■□□□□ 0.29
RAE1P78406 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RAE1P78406 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.83■□□□□ 0.29
RAE1P78406 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
RAE1P78406 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms