Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CLDN20P56880 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN20P56880 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.33■□□□□ 0.2
CLDN20P56880 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN20P56880 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
CLDN20P56880 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN20P56880 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.33■□□□□ 0.2
CLDN20P56880 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN20P56880 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CLDN20P56880 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.33■□□□□ 0.2
CLDN20P56880 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CLDN20P56880 LINC00602-201ENST00000629776 2065 ntBASIC16.33■□□□□ 0.2
CLDN20P56880 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN20P56880 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN20P56880 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CLDN20P56880 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CLDN20P56880 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN20P56880 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN20P56880 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN20P56880 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.32■□□□□ 0.2
CLDN20P56880 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN20P56880 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN20P56880 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN20P56880 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN20P56880 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.32■□□□□ 0.2
CLDN20P56880 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN20P56880 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN20P56880 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CLDN20P56880 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CLDN20P56880 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN20P56880 ATP5G2P1-201ENST00000433580 426 ntBASIC16.32■□□□□ 0.2
CLDN20P56880 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN20P56880 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.32■□□□□ 0.2
CLDN20P56880 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.32■□□□□ 0.2
CLDN20P56880 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.32■□□□□ 0.2
CLDN20P56880 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
CLDN20P56880 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN20P56880 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.32■□□□□ 0.2
CLDN20P56880 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CLDN20P56880 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.32■□□□□ 0.2
CLDN20P56880 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN20P56880 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN20P56880 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN20P56880 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN20P56880 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CLDN20P56880 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CLDN20P56880 PHGDH-209ENST00000641074 1780 ntBASIC16.31■□□□□ 0.2
CLDN20P56880 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.31■□□□□ 0.2
CLDN20P56880 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CLDN20P56880 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN20P56880 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CLDN20P56880 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CLDN20P56880 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN20P56880 KRT18P1-202ENST00000452408 1331 ntBASIC16.31■□□□□ 0.2
CLDN20P56880 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN20P56880 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN20P56880 HCG4P8-203ENST00000443049 980 ntBASIC16.31■□□□□ 0.2
CLDN20P56880 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.31■□□□□ 0.2
CLDN20P56880 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.31■□□□□ 0.2
CLDN20P56880 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
CLDN20P56880 AP002414.4-201ENST00000589764 1148 ntBASIC16.31■□□□□ 0.2
CLDN20P56880 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN20P56880 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN20P56880 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN20P56880 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CLDN20P56880 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN20P56880 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CLDN20P56880 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CLDN20P56880 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.31■□□□□ 0.2
CLDN20P56880 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.31■□□□□ 0.2
CLDN20P56880 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN20P56880 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN20P56880 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CLDN20P56880 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CLDN20P56880 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.31■□□□□ 0.2
CLDN20P56880 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN20P56880 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN20P56880 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN20P56880 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN20P56880 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN20P56880 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.3■□□□□ 0.2
CLDN20P56880 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.3■□□□□ 0.2
CLDN20P56880 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN20P56880 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN20P56880 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN20P56880 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN20P56880 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN20P56880 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN20P56880 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
CLDN20P56880 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.3■□□□□ 0.2
CLDN20P56880 SLC25A6P5-201ENST00000435663 894 ntBASIC16.3■□□□□ 0.2
CLDN20P56880 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN20P56880 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN20P56880 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CLDN20P56880 IGHV3-41-201ENST00000613121 348 ntBASIC16.3■□□□□ 0.2
CLDN20P56880 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN20P56880 AC135776.1-201ENST00000319817 2481 ntBASIC16.3■□□□□ 0.2
CLDN20P56880 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN20P56880 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN20P56880 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms