Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.95■□□□□ 0.46
LIMK2P53671 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LIMK2P53671 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
LIMK2P53671 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LIMK2P53671 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
LIMK2P53671 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LIMK2P53671 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LIMK2P53671 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.95■□□□□ 0.46
LIMK2P53671 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.95■□□□□ 0.46
LIMK2P53671 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LIMK2P53671 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.94■□□□□ 0.46
LIMK2P53671 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LIMK2P53671 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LIMK2P53671 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
LIMK2P53671 AC133963.1-201ENST00000504166 1679 ntBASIC17.94■□□□□ 0.46
LIMK2P53671 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LIMK2P53671 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LIMK2P53671 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LIMK2P53671 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LIMK2P53671 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.94■□□□□ 0.46
LIMK2P53671 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.94■□□□□ 0.46
LIMK2P53671 PVRIG2P-201ENST00000435460 978 ntBASIC17.94■□□□□ 0.46
LIMK2P53671 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.94■□□□□ 0.46
LIMK2P53671 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LIMK2P53671 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.94■□□□□ 0.46
LIMK2P53671 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.94■□□□□ 0.46
LIMK2P53671 AL121894.2-201ENST00000602977 491 ntBASIC17.94■□□□□ 0.46
LIMK2P53671 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LIMK2P53671 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LIMK2P53671 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LIMK2P53671 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LIMK2P53671 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
LIMK2P53671 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.94■□□□□ 0.46
LIMK2P53671 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
LIMK2P53671 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LIMK2P53671 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.93■□□□□ 0.46
LIMK2P53671 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.93■□□□□ 0.46
LIMK2P53671 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.93■□□□□ 0.46
LIMK2P53671 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LIMK2P53671 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.93■□□□□ 0.46
LIMK2P53671 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
LIMK2P53671 PRORSD1P-202ENST00000563365 2154 ntBASIC17.93■□□□□ 0.46
LIMK2P53671 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LIMK2P53671 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LIMK2P53671 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
LIMK2P53671 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LIMK2P53671 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.93■□□□□ 0.46
LIMK2P53671 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.93■□□□□ 0.46
LIMK2P53671 BX276092.5-203ENST00000456199 560 ntBASIC17.93■□□□□ 0.46
LIMK2P53671 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.93■□□□□ 0.46
LIMK2P53671 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
LIMK2P53671 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.93■□□□□ 0.46
LIMK2P53671 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.93■□□□□ 0.46
LIMK2P53671 AL136038.4-201ENST00000603606 1261 ntBASIC17.93■□□□□ 0.46
LIMK2P53671 AL121672.3-201ENST00000608644 468 ntBASIC17.93■□□□□ 0.46
LIMK2P53671 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.93■□□□□ 0.46
LIMK2P53671 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.93■□□□□ 0.46
LIMK2P53671 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.93■□□□□ 0.46
LIMK2P53671 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
LIMK2P53671 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
LIMK2P53671 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.93■□□□□ 0.46
LIMK2P53671 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LIMK2P53671 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
LIMK2P53671 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LIMK2P53671 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.93■□□□□ 0.46
LIMK2P53671 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LIMK2P53671 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LIMK2P53671 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.93■□□□□ 0.46
LIMK2P53671 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.93■□□□□ 0.46
LIMK2P53671 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LIMK2P53671 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LIMK2P53671 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LIMK2P53671 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.92■□□□□ 0.46
LIMK2P53671 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LIMK2P53671 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LIMK2P53671 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LIMK2P53671 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LIMK2P53671 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
LIMK2P53671 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.92■□□□□ 0.46
LIMK2P53671 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
LIMK2P53671 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.92■□□□□ 0.46
LIMK2P53671 AL023806.1-201ENST00000603994 1649 ntBASIC17.92■□□□□ 0.46
LIMK2P53671 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LIMK2P53671 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
LIMK2P53671 TSSC2-201ENST00000450217 709 ntBASIC17.92■□□□□ 0.46
LIMK2P53671 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.92■□□□□ 0.46
LIMK2P53671 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.92■□□□□ 0.46
LIMK2P53671 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.92■□□□□ 0.46
LIMK2P53671 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
LIMK2P53671 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.92■□□□□ 0.46
LIMK2P53671 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.92■□□□□ 0.46
LIMK2P53671 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.92■□□□□ 0.46
LIMK2P53671 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.92■□□□□ 0.46
LIMK2P53671 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LIMK2P53671 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LIMK2P53671 AC092119.3-201ENST00000612618 583 ntBASIC17.92■□□□□ 0.46
LIMK2P53671 AL391807.1-203ENST00000604392 2365 ntBASIC17.92■□□□□ 0.46
LIMK2P53671 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.92■□□□□ 0.46
LIMK2P53671 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LIMK2P53671 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms