Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 TNRC18P2-201ENST00000417666 2714 ntBASIC17.48■□□□□ 0.39
GTF2A1P52655 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
GTF2A1P52655 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
GTF2A1P52655 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.48■□□□□ 0.39
GTF2A1P52655 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
GTF2A1P52655 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
GTF2A1P52655 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.48■□□□□ 0.39
GTF2A1P52655 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
GTF2A1P52655 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
GTF2A1P52655 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
GTF2A1P52655 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.48■□□□□ 0.39
GTF2A1P52655 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GTF2A1P52655 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
GTF2A1P52655 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GTF2A1P52655 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GTF2A1P52655 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.48■□□□□ 0.39
GTF2A1P52655 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GTF2A1P52655 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.47■□□□□ 0.39
GTF2A1P52655 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
GTF2A1P52655 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
GTF2A1P52655 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GTF2A1P52655 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.47■□□□□ 0.39
GTF2A1P52655 AC092068.3-201ENST00000587894 2016 ntBASIC17.47■□□□□ 0.39
GTF2A1P52655 AC008556.1-201ENST00000610908 2040 ntBASIC17.47■□□□□ 0.39
GTF2A1P52655 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GTF2A1P52655 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.47■□□□□ 0.39
GTF2A1P52655 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
GTF2A1P52655 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GTF2A1P52655 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
GTF2A1P52655 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.47■□□□□ 0.39
GTF2A1P52655 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.47■□□□□ 0.39
GTF2A1P52655 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.47■□□□□ 0.39
GTF2A1P52655 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.47■□□□□ 0.39
GTF2A1P52655 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GTF2A1P52655 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GTF2A1P52655 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GTF2A1P52655 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
GTF2A1P52655 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.47■□□□□ 0.39
GTF2A1P52655 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.47■□□□□ 0.39
GTF2A1P52655 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GTF2A1P52655 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GTF2A1P52655 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GTF2A1P52655 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GTF2A1P52655 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
GTF2A1P52655 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.47■□□□□ 0.39
GTF2A1P52655 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
GTF2A1P52655 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GTF2A1P52655 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GTF2A1P52655 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
GTF2A1P52655 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
GTF2A1P52655 AL137784.3-201ENST00000623858 2288 ntBASIC17.46■□□□□ 0.39
GTF2A1P52655 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
GTF2A1P52655 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GTF2A1P52655 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
GTF2A1P52655 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GTF2A1P52655 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.46■□□□□ 0.39
GTF2A1P52655 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.46■□□□□ 0.39
GTF2A1P52655 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.46■□□□□ 0.39
GTF2A1P52655 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GTF2A1P52655 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.46■□□□□ 0.39
GTF2A1P52655 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GTF2A1P52655 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GTF2A1P52655 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
GTF2A1P52655 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.46■□□□□ 0.39
GTF2A1P52655 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GTF2A1P52655 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
GTF2A1P52655 AC123595.1-201ENST00000440769 1046 ntBASIC17.46■□□□□ 0.39
GTF2A1P52655 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.46■□□□□ 0.39
GTF2A1P52655 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GTF2A1P52655 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.46■□□□□ 0.39
GTF2A1P52655 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.46■□□□□ 0.39
GTF2A1P52655 UBE2DNL-204ENST00000602536 740 ntBASIC17.46■□□□□ 0.39
GTF2A1P52655 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
GTF2A1P52655 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
GTF2A1P52655 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.46■□□□□ 0.39
GTF2A1P52655 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC17.46■□□□□ 0.39
GTF2A1P52655 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
GTF2A1P52655 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
GTF2A1P52655 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.46■□□□□ 0.39
GTF2A1P52655 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
GTF2A1P52655 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC17.46■□□□□ 0.39
GTF2A1P52655 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
GTF2A1P52655 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.46■□□□□ 0.38
GTF2A1P52655 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
GTF2A1P52655 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
GTF2A1P52655 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
GTF2A1P52655 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
GTF2A1P52655 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.46■□□□□ 0.38
GTF2A1P52655 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
GTF2A1P52655 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.45■□□□□ 0.38
GTF2A1P52655 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
GTF2A1P52655 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC17.45■□□□□ 0.38
GTF2A1P52655 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GTF2A1P52655 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
GTF2A1P52655 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GTF2A1P52655 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.45■□□□□ 0.38
GTF2A1P52655 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.45■□□□□ 0.38
GTF2A1P52655 KRT18P14-201ENST00000534205 1250 ntBASIC17.45■□□□□ 0.38
GTF2A1P52655 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.45■□□□□ 0.38
GTF2A1P52655 RALB-208ENST00000631312 311 ntTSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms