Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SRP9P49458 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
SRP9P49458 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
SRP9P49458 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
SRP9P49458 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
SRP9P49458 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SRP9P49458 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SRP9P49458 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SRP9P49458 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
SRP9P49458 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC15.82■□□□□ 0.12
SRP9P49458 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
SRP9P49458 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SRP9P49458 ILF2-202ENST00000368681 726 ntTSL 2 BASIC15.82■□□□□ 0.12
SRP9P49458 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SRP9P49458 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.82■□□□□ 0.12
SRP9P49458 BX664615.1-201ENST00000443558 458 ntBASIC15.82■□□□□ 0.12
SRP9P49458 AC009947.2-201ENST00000444014 672 ntBASIC15.82■□□□□ 0.12
SRP9P49458 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC15.82■□□□□ 0.12
SRP9P49458 AC010203.1-204ENST00000548782 407 ntBASIC15.82■□□□□ 0.12
SRP9P49458 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC15.82■□□□□ 0.12
SRP9P49458 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SRP9P49458 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.82■□□□□ 0.12
SRP9P49458 AC092865.7-201ENST00000641832 219 ntBASIC15.82■□□□□ 0.12
SRP9P49458 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SRP9P49458 PCDH8P1-201ENST00000428983 2773 ntBASIC15.82■□□□□ 0.12
SRP9P49458 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SRP9P49458 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SRP9P49458 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SRP9P49458 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC15.82■□□□□ 0.12
SRP9P49458 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SRP9P49458 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SRP9P49458 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SRP9P49458 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
SRP9P49458 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
SRP9P49458 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC15.82■□□□□ 0.12
SRP9P49458 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SRP9P49458 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SRP9P49458 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.82■□□□□ 0.12
SRP9P49458 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SRP9P49458 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SRP9P49458 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SRP9P49458 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
SRP9P49458 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SRP9P49458 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SRP9P49458 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SRP9P49458 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SRP9P49458 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC15.81■□□□□ 0.12
SRP9P49458 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC15.81■□□□□ 0.12
SRP9P49458 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SRP9P49458 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SRP9P49458 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.81■□□□□ 0.12
SRP9P49458 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SRP9P49458 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.81■□□□□ 0.12
SRP9P49458 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SRP9P49458 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.81■□□□□ 0.12
SRP9P49458 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SRP9P49458 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC15.81■□□□□ 0.12
SRP9P49458 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC15.81■□□□□ 0.12
SRP9P49458 AL096828.2-201ENST00000567259 1965 ntBASIC15.81■□□□□ 0.12
SRP9P49458 AC006116.8-202ENST00000587620 1550 ntBASIC15.81■□□□□ 0.12
SRP9P49458 AC140113.3-201ENST00000605663 199 ntBASIC15.81■□□□□ 0.12
SRP9P49458 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC15.81■□□□□ 0.12
SRP9P49458 AL138966.2-201ENST00000621997 464 ntBASIC15.81■□□□□ 0.12
SRP9P49458 AC011270.2-201ENST00000624293 2550 ntBASIC15.81■□□□□ 0.12
SRP9P49458 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.81■□□□□ 0.12
SRP9P49458 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SRP9P49458 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SRP9P49458 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SRP9P49458 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SRP9P49458 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SRP9P49458 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.81■□□□□ 0.12
SRP9P49458 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
SRP9P49458 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SRP9P49458 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
SRP9P49458 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
SRP9P49458 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SRP9P49458 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.8■□□□□ 0.12
SRP9P49458 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SRP9P49458 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SRP9P49458 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC15.8■□□□□ 0.12
SRP9P49458 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SRP9P49458 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SRP9P49458 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SRP9P49458 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SRP9P49458 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
SRP9P49458 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SRP9P49458 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.8■□□□□ 0.12
SRP9P49458 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.8■□□□□ 0.12
SRP9P49458 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SRP9P49458 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SRP9P49458 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
SRP9P49458 AP000593.1-201ENST00000393668 712 ntBASIC15.8■□□□□ 0.12
SRP9P49458 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SRP9P49458 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SRP9P49458 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SRP9P49458 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SRP9P49458 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC15.8■□□□□ 0.12
SRP9P49458 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC15.8■□□□□ 0.12
SRP9P49458 KRT18P23-201ENST00000435622 1283 ntBASIC15.8■□□□□ 0.12
SRP9P49458 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms