Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HTTP42858 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HTTP42858 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HTTP42858 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HTTP42858 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
HTTP42858 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HTTP42858 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
HTTP42858 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.82■□□□□ 0.76
HTTP42858 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HTTP42858 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.82■□□□□ 0.76
HTTP42858 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
HTTP42858 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HTTP42858 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
HTTP42858 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.82■□□□□ 0.76
HTTP42858 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC19.82■□□□□ 0.76
HTTP42858 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
HTTP42858 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.82■□□□□ 0.76
HTTP42858 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HTTP42858 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
HTTP42858 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.82■□□□□ 0.76
HTTP42858 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.82■□□□□ 0.76
HTTP42858 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HTTP42858 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.82■□□□□ 0.76
HTTP42858 TDG-209ENST00000544861 1387 ntTSL 2 BASIC19.82■□□□□ 0.76
HTTP42858 VMA21-202ENST00000370361 693 ntTSL 5 BASIC19.82■□□□□ 0.76
HTTP42858 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HTTP42858 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.82■□□□□ 0.76
HTTP42858 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.82■□□□□ 0.76
HTTP42858 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.82■□□□□ 0.76
HTTP42858 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
HTTP42858 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.82■□□□□ 0.76
HTTP42858 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.82■□□□□ 0.76
HTTP42858 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HTTP42858 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.81■□□□□ 0.76
HTTP42858 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
HTTP42858 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.81■□□□□ 0.76
HTTP42858 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC19.81■□□□□ 0.76
HTTP42858 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.81■□□□□ 0.76
HTTP42858 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HTTP42858 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
HTTP42858 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HTTP42858 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.81■□□□□ 0.76
HTTP42858 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HTTP42858 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HTTP42858 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HTTP42858 AC107890.1-201ENST00000422478 521 ntBASIC19.81■□□□□ 0.76
HTTP42858 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.81■□□□□ 0.76
HTTP42858 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HTTP42858 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HTTP42858 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HTTP42858 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HTTP42858 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
HTTP42858 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
HTTP42858 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HTTP42858 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HTTP42858 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HTTP42858 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HTTP42858 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.8■□□□□ 0.76
HTTP42858 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HTTP42858 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HTTP42858 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HTTP42858 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HTTP42858 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HTTP42858 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HTTP42858 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.8■□□□□ 0.76
HTTP42858 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.8■□□□□ 0.76
HTTP42858 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HTTP42858 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.8■□□□□ 0.76
HTTP42858 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HTTP42858 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HTTP42858 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.8■□□□□ 0.76
HTTP42858 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.8■□□□□ 0.76
HTTP42858 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
HTTP42858 GOLGA6L11P-201ENST00000417252 1298 ntBASIC19.8■□□□□ 0.76
HTTP42858 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC19.8■□□□□ 0.76
HTTP42858 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.8■□□□□ 0.76
HTTP42858 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.8■□□□□ 0.76
HTTP42858 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HTTP42858 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HTTP42858 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
HTTP42858 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HTTP42858 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HTTP42858 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HTTP42858 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
HTTP42858 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
HTTP42858 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
HTTP42858 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HTTP42858 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HTTP42858 KRT18P32-201ENST00000424695 1287 ntBASIC19.79■□□□□ 0.76
HTTP42858 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC19.79■□□□□ 0.76
HTTP42858 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC19.79■□□□□ 0.76
HTTP42858 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HTTP42858 AL132655.2-201ENST00000596276 594 ntBASIC19.79■□□□□ 0.76
HTTP42858 ACTL9-202ENST00000612068 1252 ntBASIC19.79■□□□□ 0.76
HTTP42858 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
HTTP42858 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.79■□□□□ 0.76
HTTP42858 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.79■□□□□ 0.76
HTTP42858 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.79■□□□□ 0.76
HTTP42858 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HTTP42858 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms