Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RPA3P35244 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RPA3P35244 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RPA3P35244 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RPA3P35244 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.99■□□□□ 0.47
RPA3P35244 AP000523.1-201ENST00000398242 1049 ntBASIC17.99■□□□□ 0.47
RPA3P35244 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RPA3P35244 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RPA3P35244 KRT18P23-201ENST00000435622 1283 ntBASIC17.99■□□□□ 0.47
RPA3P35244 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.99■□□□□ 0.47
RPA3P35244 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.99■□□□□ 0.47
RPA3P35244 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
RPA3P35244 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RPA3P35244 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.99■□□□□ 0.47
RPA3P35244 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
RPA3P35244 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.99■□□□□ 0.47
RPA3P35244 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RPA3P35244 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.99■□□□□ 0.47
RPA3P35244 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RPA3P35244 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.99■□□□□ 0.47
RPA3P35244 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RPA3P35244 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.99■□□□□ 0.47
RPA3P35244 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RPA3P35244 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RPA3P35244 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.99■□□□□ 0.47
RPA3P35244 UBALD1-205ENST00000590891 2641 ntBASIC17.99■□□□□ 0.47
RPA3P35244 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.99■□□□□ 0.47
RPA3P35244 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RPA3P35244 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
RPA3P35244 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
RPA3P35244 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RPA3P35244 HOXB1-202ENST00000577092 1414 ntBASIC17.98■□□□□ 0.47
RPA3P35244 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RPA3P35244 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPA3P35244 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPA3P35244 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RPA3P35244 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPA3P35244 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
RPA3P35244 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPA3P35244 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPA3P35244 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.98■□□□□ 0.47
RPA3P35244 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.98■□□□□ 0.47
RPA3P35244 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.98■□□□□ 0.47
RPA3P35244 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.98■□□□□ 0.47
RPA3P35244 KRT18P57-201ENST00000443599 1254 ntBASIC17.98■□□□□ 0.47
RPA3P35244 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPA3P35244 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RPA3P35244 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.98■□□□□ 0.47
RPA3P35244 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.98■□□□□ 0.47
RPA3P35244 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RPA3P35244 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.98■□□□□ 0.47
RPA3P35244 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.98■□□□□ 0.47
RPA3P35244 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.98■□□□□ 0.47
RPA3P35244 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPA3P35244 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPA3P35244 AC018695.7-201ENST00000624587 2492 ntBASIC17.98■□□□□ 0.47
RPA3P35244 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
RPA3P35244 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.98■□□□□ 0.47
RPA3P35244 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RPA3P35244 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.98■□□□□ 0.47
RPA3P35244 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPA3P35244 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RPA3P35244 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPA3P35244 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RPA3P35244 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.97■□□□□ 0.47
RPA3P35244 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
RPA3P35244 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
RPA3P35244 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RPA3P35244 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RPA3P35244 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RPA3P35244 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RPA3P35244 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
RPA3P35244 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RPA3P35244 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.97■□□□□ 0.47
RPA3P35244 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
RPA3P35244 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RPA3P35244 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RPA3P35244 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RPA3P35244 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RPA3P35244 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.97■□□□□ 0.47
RPA3P35244 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
RPA3P35244 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.97■□□□□ 0.47
RPA3P35244 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.97■□□□□ 0.47
RPA3P35244 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.97■□□□□ 0.47
RPA3P35244 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.97■□□□□ 0.47
RPA3P35244 NEK4P2-201ENST00000580004 1012 ntBASIC17.97■□□□□ 0.47
RPA3P35244 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.97■□□□□ 0.47
RPA3P35244 AL138966.2-201ENST00000621997 464 ntBASIC17.97■□□□□ 0.47
RPA3P35244 AC112497.1-201ENST00000624824 639 ntBASIC17.97■□□□□ 0.47
RPA3P35244 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
RPA3P35244 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RPA3P35244 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
RPA3P35244 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.97■□□□□ 0.47
RPA3P35244 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
RPA3P35244 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RPA3P35244 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RPA3P35244 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RPA3P35244 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RPA3P35244 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.97■□□□□ 0.47
RPA3P35244 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms