Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
SLC6A4P31645 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SLC6A4P31645 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.24■□□□□ 0.51
SLC6A4P31645 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.24■□□□□ 0.51
SLC6A4P31645 SLC25A6P4-201ENST00000586535 553 ntBASIC18.24■□□□□ 0.51
SLC6A4P31645 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.24■□□□□ 0.51
SLC6A4P31645 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.24■□□□□ 0.51
SLC6A4P31645 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.24■□□□□ 0.51
SLC6A4P31645 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.24■□□□□ 0.51
SLC6A4P31645 AP000867.4-201ENST00000641616 219 ntBASIC18.24■□□□□ 0.51
SLC6A4P31645 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.24■□□□□ 0.51
SLC6A4P31645 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC6A4P31645 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.24■□□□□ 0.51
SLC6A4P31645 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SLC6A4P31645 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.24■□□□□ 0.51
SLC6A4P31645 AC138932.1-201ENST00000534164 6830 ntBASIC18.24■□□□□ 0.51
SLC6A4P31645 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC6A4P31645 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC6A4P31645 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.23■□□□□ 0.51
SLC6A4P31645 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.23■□□□□ 0.51
SLC6A4P31645 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
SLC6A4P31645 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.23■□□□□ 0.51
SLC6A4P31645 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SLC6A4P31645 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SLC6A4P31645 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC6A4P31645 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SLC6A4P31645 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC6A4P31645 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SLC6A4P31645 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.23■□□□□ 0.51
SLC6A4P31645 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SLC6A4P31645 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.23■□□□□ 0.51
SLC6A4P31645 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SLC6A4P31645 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.23■□□□□ 0.51
SLC6A4P31645 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SLC6A4P31645 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
SLC6A4P31645 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.23■□□□□ 0.51
SLC6A4P31645 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SLC6A4P31645 AD001527.2-201ENST00000622994 785 ntBASIC18.23■□□□□ 0.51
SLC6A4P31645 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
SLC6A4P31645 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC6A4P31645 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.23■□□□□ 0.51
SLC6A4P31645 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC6A4P31645 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC6A4P31645 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
SLC6A4P31645 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC6A4P31645 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC6A4P31645 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC6A4P31645 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC6A4P31645 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC6A4P31645 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SLC6A4P31645 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC6A4P31645 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
SLC6A4P31645 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC6A4P31645 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.22■□□□□ 0.51
SLC6A4P31645 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SLC6A4P31645 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.22■□□□□ 0.51
SLC6A4P31645 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC6A4P31645 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.22■□□□□ 0.51
SLC6A4P31645 FAM197Y8-203ENST00000450145 560 ntBASIC18.22■□□□□ 0.51
SLC6A4P31645 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.22■□□□□ 0.51
SLC6A4P31645 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.22■□□□□ 0.51
SLC6A4P31645 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SLC6A4P31645 AC019129.2-201ENST00000609837 1235 ntBASIC18.22■□□□□ 0.51
SLC6A4P31645 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.22■□□□□ 0.51
SLC6A4P31645 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.22■□□□□ 0.51
SLC6A4P31645 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.22■□□□□ 0.51
SLC6A4P31645 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.22■□□□□ 0.51
SLC6A4P31645 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SLC6A4P31645 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
SLC6A4P31645 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SLC6A4P31645 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.22■□□□□ 0.51
SLC6A4P31645 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC6A4P31645 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC6A4P31645 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC6A4P31645 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SLC6A4P31645 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC6A4P31645 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
SLC6A4P31645 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC6A4P31645 AL049757.1-201ENST00000616842 1596 ntBASIC18.21■□□□□ 0.51
SLC6A4P31645 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SLC6A4P31645 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SLC6A4P31645 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC6A4P31645 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC6A4P31645 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC6A4P31645 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SLC6A4P31645 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SLC6A4P31645 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.21■□□□□ 0.51
SLC6A4P31645 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.21■□□□□ 0.51
SLC6A4P31645 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.21■□□□□ 0.51
SLC6A4P31645 SART3-203ENST00000546611 1184 ntBASIC18.21■□□□□ 0.51
SLC6A4P31645 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
SLC6A4P31645 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.21■□□□□ 0.51
SLC6A4P31645 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SLC6A4P31645 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.21■□□□□ 0.51
SLC6A4P31645 AC148477.8-201ENST00000624298 468 ntBASIC18.21■□□□□ 0.51
SLC6A4P31645 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.21■□□□□ 0.51
SLC6A4P31645 BX276092.7-203ENST00000637198 1536 ntBASIC18.21■□□□□ 0.51
SLC6A4P31645 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.21■□□□□ 0.51
SLC6A4P31645 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC6A4P31645 PMPCAP1-201ENST00000508114 1576 ntBASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms