Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHC1P29353 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHC1P29353 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
SHC1P29353 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHC1P29353 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHC1P29353 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SHC1P29353 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SHC1P29353 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SHC1P29353 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SHC1P29353 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHC1P29353 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.32■□□□□ 0.2
SHC1P29353 AL353692.3-201ENST00000407031 1396 ntBASIC16.32■□□□□ 0.2
SHC1P29353 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHC1P29353 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHC1P29353 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.32■□□□□ 0.2
SHC1P29353 TSPY22P-201ENST00000427496 604 ntBASIC16.32■□□□□ 0.2
SHC1P29353 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHC1P29353 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
SHC1P29353 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.32■□□□□ 0.2
SHC1P29353 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHC1P29353 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.32■□□□□ 0.2
SHC1P29353 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.32■□□□□ 0.2
SHC1P29353 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.32■□□□□ 0.2
SHC1P29353 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHC1P29353 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHC1P29353 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHC1P29353 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHC1P29353 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.32■□□□□ 0.2
SHC1P29353 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.31■□□□□ 0.2
SHC1P29353 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.31■□□□□ 0.2
SHC1P29353 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.31■□□□□ 0.2
SHC1P29353 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.31■□□□□ 0.2
SHC1P29353 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SHC1P29353 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SHC1P29353 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHC1P29353 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SHC1P29353 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SHC1P29353 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHC1P29353 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.31■□□□□ 0.2
SHC1P29353 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SHC1P29353 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHC1P29353 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SHC1P29353 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.31■□□□□ 0.2
SHC1P29353 AC113404.2-201ENST00000507884 177 ntBASIC16.31■□□□□ 0.2
SHC1P29353 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.31■□□□□ 0.2
SHC1P29353 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.31■□□□□ 0.2
SHC1P29353 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SHC1P29353 AC091076.1-201ENST00000610741 619 ntBASIC16.31■□□□□ 0.2
SHC1P29353 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHC1P29353 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SHC1P29353 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.31■□□□□ 0.2
SHC1P29353 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHC1P29353 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHC1P29353 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SHC1P29353 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SHC1P29353 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHC1P29353 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHC1P29353 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHC1P29353 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHC1P29353 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.31■□□□□ 0.2
SHC1P29353 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
SHC1P29353 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SHC1P29353 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.31■□□□□ 0.2
SHC1P29353 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHC1P29353 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHC1P29353 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHC1P29353 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.3■□□□□ 0.2
SHC1P29353 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHC1P29353 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHC1P29353 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
SHC1P29353 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SHC1P29353 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.3■□□□□ 0.2
SHC1P29353 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHC1P29353 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHC1P29353 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
SHC1P29353 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHC1P29353 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHC1P29353 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
SHC1P29353 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHC1P29353 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SHC1P29353 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.3■□□□□ 0.2
SHC1P29353 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHC1P29353 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SHC1P29353 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.3■□□□□ 0.2
SHC1P29353 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHC1P29353 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHC1P29353 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SHC1P29353 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
SHC1P29353 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHC1P29353 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.3■□□□□ 0.2
SHC1P29353 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.3■□□□□ 0.2
SHC1P29353 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.3■□□□□ 0.2
SHC1P29353 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.3■□□□□ 0.2
SHC1P29353 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.3■□□□□ 0.2
SHC1P29353 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.3■□□□□ 0.2
SHC1P29353 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.3■□□□□ 0.2
SHC1P29353 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.3■□□□□ 0.2
SHC1P29353 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.3■□□□□ 0.2
SHC1P29353 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.3■□□□□ 0.2
SHC1P29353 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms