Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
NCK1P16333 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NCK1P16333 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NCK1P16333 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NCK1P16333 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NCK1P16333 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NCK1P16333 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
NCK1P16333 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NCK1P16333 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NCK1P16333 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NCK1P16333 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.83■□□□□ 0.28
NCK1P16333 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NCK1P16333 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NCK1P16333 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NCK1P16333 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NCK1P16333 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NCK1P16333 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.83■□□□□ 0.28
NCK1P16333 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
NCK1P16333 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.83■□□□□ 0.28
NCK1P16333 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.83■□□□□ 0.28
NCK1P16333 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.83■□□□□ 0.28
NCK1P16333 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NCK1P16333 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NCK1P16333 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NCK1P16333 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
NCK1P16333 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NCK1P16333 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.28
NCK1P16333 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
NCK1P16333 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NCK1P16333 PCDHA14-201ENST00000506751 2298 ntBASIC16.82■□□□□ 0.28
NCK1P16333 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NCK1P16333 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NCK1P16333 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NCK1P16333 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NCK1P16333 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.82■□□□□ 0.28
NCK1P16333 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NCK1P16333 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NCK1P16333 AC009949.1-201ENST00000623048 1830 ntBASIC16.82■□□□□ 0.28
NCK1P16333 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NCK1P16333 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NCK1P16333 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NCK1P16333 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NCK1P16333 PCDH8P1-201ENST00000428983 2773 ntBASIC16.82■□□□□ 0.28
NCK1P16333 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.82■□□□□ 0.28
NCK1P16333 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NCK1P16333 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NCK1P16333 ID1-201ENST00000376105 1233 ntBASIC16.82■□□□□ 0.28
NCK1P16333 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NCK1P16333 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
NCK1P16333 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NCK1P16333 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
NCK1P16333 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.82■□□□□ 0.28
NCK1P16333 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.82■□□□□ 0.28
NCK1P16333 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.82■□□□□ 0.28
NCK1P16333 AL359736.2-201ENST00000621992 437 ntBASIC16.82■□□□□ 0.28
NCK1P16333 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.82■□□□□ 0.28
NCK1P16333 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.82■□□□□ 0.28
NCK1P16333 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
NCK1P16333 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.82■□□□□ 0.28
NCK1P16333 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
NCK1P16333 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NCK1P16333 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NCK1P16333 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
NCK1P16333 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NCK1P16333 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
NCK1P16333 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
NCK1P16333 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.81■□□□□ 0.28
NCK1P16333 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NCK1P16333 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
NCK1P16333 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NCK1P16333 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NCK1P16333 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
NCK1P16333 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.81■□□□□ 0.28
NCK1P16333 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.81■□□□□ 0.28
NCK1P16333 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NCK1P16333 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
NCK1P16333 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NCK1P16333 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
NCK1P16333 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
NCK1P16333 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NCK1P16333 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.81■□□□□ 0.28
NCK1P16333 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.81■□□□□ 0.28
NCK1P16333 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.81■□□□□ 0.28
NCK1P16333 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.81■□□□□ 0.28
NCK1P16333 WWOX-216ENST00000569818 525 ntBASIC16.81■□□□□ 0.28
NCK1P16333 MIR4651-201ENST00000582622 73 ntBASIC16.81■□□□□ 0.28
NCK1P16333 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.81■□□□□ 0.28
NCK1P16333 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NCK1P16333 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NCK1P16333 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.81■□□□□ 0.28
NCK1P16333 AC105020.1-201ENST00000435356 2205 ntBASIC16.81■□□□□ 0.28
NCK1P16333 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NCK1P16333 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.81■□□□□ 0.28
NCK1P16333 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NCK1P16333 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NCK1P16333 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
NCK1P16333 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.81■□□□□ 0.28
NCK1P16333 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NCK1P16333 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NCK1P16333 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms