Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.89■□□□□ 0.93
TOP1P11387 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TOP1P11387 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TOP1P11387 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.89■□□□□ 0.93
TOP1P11387 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TOP1P11387 AC096633.1-201ENST00000422446 749 ntBASIC20.89■□□□□ 0.93
TOP1P11387 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.89■□□□□ 0.93
TOP1P11387 FAAHP1-202ENST00000446499 1238 ntBASIC20.89■□□□□ 0.93
TOP1P11387 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.89■□□□□ 0.93
TOP1P11387 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TOP1P11387 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.89■□□□□ 0.93
TOP1P11387 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TOP1P11387 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.89■□□□□ 0.93
TOP1P11387 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
TOP1P11387 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TOP1P11387 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.89■□□□□ 0.93
TOP1P11387 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TOP1P11387 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.89■□□□□ 0.93
TOP1P11387 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TOP1P11387 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.89■□□□□ 0.93
TOP1P11387 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.89■□□□□ 0.93
TOP1P11387 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TOP1P11387 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.88■□□□□ 0.93
TOP1P11387 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TOP1P11387 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TOP1P11387 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.88■□□□□ 0.93
TOP1P11387 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
TOP1P11387 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.88■□□□□ 0.93
TOP1P11387 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
TOP1P11387 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.88■□□□□ 0.93
TOP1P11387 LTB4R2-202ENST00000528054 3092 ntBASIC20.88■□□□□ 0.93
TOP1P11387 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
TOP1P11387 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TOP1P11387 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TOP1P11387 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TOP1P11387 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TOP1P11387 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.88■□□□□ 0.93
TOP1P11387 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
TOP1P11387 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.88■□□□□ 0.93
TOP1P11387 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.88■□□□□ 0.93
TOP1P11387 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.88■□□□□ 0.93
TOP1P11387 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TOP1P11387 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TOP1P11387 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TOP1P11387 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
TOP1P11387 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TOP1P11387 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TOP1P11387 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TOP1P11387 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
TOP1P11387 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
TOP1P11387 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
TOP1P11387 INTS4P1-201ENST00000438455 1935 ntBASIC20.88■□□□□ 0.93
TOP1P11387 ABALON-201ENST00000629058 1903 ntBASIC20.88■□□□□ 0.93
TOP1P11387 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TOP1P11387 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
TOP1P11387 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TOP1P11387 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TOP1P11387 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TOP1P11387 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TOP1P11387 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TOP1P11387 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.87■□□□□ 0.93
TOP1P11387 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.87■□□□□ 0.93
TOP1P11387 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TOP1P11387 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TOP1P11387 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TOP1P11387 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TOP1P11387 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
TOP1P11387 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.87■□□□□ 0.93
TOP1P11387 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
TOP1P11387 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.87■□□□□ 0.93
TOP1P11387 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC20.87■□□□□ 0.93
TOP1P11387 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.87■□□□□ 0.93
TOP1P11387 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.87■□□□□ 0.93
TOP1P11387 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.87■□□□□ 0.93
TOP1P11387 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TOP1P11387 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.87■□□□□ 0.93
TOP1P11387 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.87■□□□□ 0.93
TOP1P11387 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TOP1P11387 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TOP1P11387 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TOP1P11387 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
TOP1P11387 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.87■□□□□ 0.93
TOP1P11387 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TOP1P11387 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TOP1P11387 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.87■□□□□ 0.93
TOP1P11387 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC20.86■□□□□ 0.93
TOP1P11387 HTR7P1-202ENST00000624664 4411 ntBASIC20.86■□□□□ 0.93
TOP1P11387 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
TOP1P11387 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.86■□□□□ 0.93
TOP1P11387 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TOP1P11387 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.86■□□□□ 0.93
TOP1P11387 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
TOP1P11387 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
TOP1P11387 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TOP1P11387 AKR1C7P-201ENST00000305623 895 ntBASIC20.86■□□□□ 0.93
TOP1P11387 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TOP1P11387 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.86■□□□□ 0.93
TOP1P11387 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.86■□□□□ 0.93
TOP1P11387 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.86■□□□□ 0.93
TOP1P11387 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms