Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.77■□□□□ 0.27
RAB40ALP0C0E4 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB40ALP0C0E4 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.77■□□□□ 0.27
RAB40ALP0C0E4 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB40ALP0C0E4 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB40ALP0C0E4 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB40ALP0C0E4 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB40ALP0C0E4 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB40ALP0C0E4 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB40ALP0C0E4 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB40ALP0C0E4 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
RAB40ALP0C0E4 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB40ALP0C0E4 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RAB40ALP0C0E4 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
RAB40ALP0C0E4 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
RAB40ALP0C0E4 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB40ALP0C0E4 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB40ALP0C0E4 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.76■□□□□ 0.27
RAB40ALP0C0E4 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB40ALP0C0E4 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.76■□□□□ 0.27
RAB40ALP0C0E4 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB40ALP0C0E4 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
RAB40ALP0C0E4 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB40ALP0C0E4 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RAB40ALP0C0E4 AC096633.1-201ENST00000422446 749 ntBASIC16.76■□□□□ 0.27
RAB40ALP0C0E4 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.76■□□□□ 0.27
RAB40ALP0C0E4 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RAB40ALP0C0E4 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.76■□□□□ 0.27
RAB40ALP0C0E4 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.76■□□□□ 0.27
RAB40ALP0C0E4 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
RAB40ALP0C0E4 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.76■□□□□ 0.27
RAB40ALP0C0E4 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.76■□□□□ 0.27
RAB40ALP0C0E4 AL671883.3-201ENST00000603274 991 ntBASIC16.76■□□□□ 0.27
RAB40ALP0C0E4 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
RAB40ALP0C0E4 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
RAB40ALP0C0E4 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB40ALP0C0E4 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB40ALP0C0E4 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB40ALP0C0E4 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB40ALP0C0E4 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB40ALP0C0E4 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB40ALP0C0E4 AC243591.1-201ENST00000452967 1364 ntBASIC16.76■□□□□ 0.27
RAB40ALP0C0E4 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB40ALP0C0E4 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB40ALP0C0E4 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAB40ALP0C0E4 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.75■□□□□ 0.27
RAB40ALP0C0E4 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB40ALP0C0E4 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.75■□□□□ 0.27
RAB40ALP0C0E4 AC022898.2-201ENST00000616822 1312 ntBASIC16.75■□□□□ 0.27
RAB40ALP0C0E4 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.75■□□□□ 0.27
RAB40ALP0C0E4 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB40ALP0C0E4 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAB40ALP0C0E4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB40ALP0C0E4 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.75■□□□□ 0.27
RAB40ALP0C0E4 AC093010.1-201ENST00000473625 1624 ntBASIC16.75■□□□□ 0.27
RAB40ALP0C0E4 AC020916.1-201ENST00000587762 1774 ntBASIC16.75■□□□□ 0.27
RAB40ALP0C0E4 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.75■□□□□ 0.27
RAB40ALP0C0E4 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB40ALP0C0E4 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB40ALP0C0E4 MIR574-201ENST00000385209 96 ntBASIC16.75■□□□□ 0.27
RAB40ALP0C0E4 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB40ALP0C0E4 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.75■□□□□ 0.27
RAB40ALP0C0E4 AC007967.3-201ENST00000434308 558 ntBASIC16.75■□□□□ 0.27
RAB40ALP0C0E4 SART3-203ENST00000546611 1184 ntBASIC16.75■□□□□ 0.27
RAB40ALP0C0E4 AC021087.4-201ENST00000563761 564 ntBASIC16.75■□□□□ 0.27
RAB40ALP0C0E4 AC106730.1-201ENST00000566722 1090 ntBASIC16.75■□□□□ 0.27
RAB40ALP0C0E4 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.75■□□□□ 0.27
RAB40ALP0C0E4 MIR7706-201ENST00000613747 67 ntBASIC16.75■□□□□ 0.27
RAB40ALP0C0E4 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.75■□□□□ 0.27
RAB40ALP0C0E4 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAB40ALP0C0E4 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB40ALP0C0E4 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.75■□□□□ 0.27
RAB40ALP0C0E4 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB40ALP0C0E4 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
RAB40ALP0C0E4 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
RAB40ALP0C0E4 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB40ALP0C0E4 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB40ALP0C0E4 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
RAB40ALP0C0E4 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.75■□□□□ 0.27
RAB40ALP0C0E4 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RAB40ALP0C0E4 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB40ALP0C0E4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RAB40ALP0C0E4 AC073592.3-201ENST00000625118 1834 ntBASIC16.75■□□□□ 0.27
RAB40ALP0C0E4 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB40ALP0C0E4 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB40ALP0C0E4 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAB40ALP0C0E4 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAB40ALP0C0E4 AL354751.1-201ENST00000412768 1863 ntBASIC16.74■□□□□ 0.27
RAB40ALP0C0E4 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.74■□□□□ 0.27
RAB40ALP0C0E4 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.74■□□□□ 0.27
RAB40ALP0C0E4 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB40ALP0C0E4 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAB40ALP0C0E4 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.74■□□□□ 0.27
RAB40ALP0C0E4 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.74■□□□□ 0.27
RAB40ALP0C0E4 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB40ALP0C0E4 HNRNPDP1-201ENST00000439535 754 ntBASIC16.74■□□□□ 0.27
RAB40ALP0C0E4 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAB40ALP0C0E4 AC122714.2-201ENST00000502787 707 ntBASIC16.74■□□□□ 0.27
RAB40ALP0C0E4 DUTP2-201ENST00000519164 463 ntBASIC16.74■□□□□ 0.27
RAB40ALP0C0E4 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms