Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
FREM3P0C091 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FREM3P0C091 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.15■□□□□ 0.18
FREM3P0C091 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.15■□□□□ 0.18
FREM3P0C091 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
FREM3P0C091 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FREM3P0C091 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.15■□□□□ 0.18
FREM3P0C091 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
FREM3P0C091 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.15■□□□□ 0.18
FREM3P0C091 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FREM3P0C091 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
FREM3P0C091 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.14■□□□□ 0.18
FREM3P0C091 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.14■□□□□ 0.18
FREM3P0C091 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
FREM3P0C091 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FREM3P0C091 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
FREM3P0C091 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.14■□□□□ 0.17
FREM3P0C091 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.14■□□□□ 0.17
FREM3P0C091 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.14■□□□□ 0.17
FREM3P0C091 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
FREM3P0C091 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FREM3P0C091 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.14■□□□□ 0.17
FREM3P0C091 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FREM3P0C091 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FREM3P0C091 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
FREM3P0C091 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.14■□□□□ 0.17
FREM3P0C091 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
FREM3P0C091 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
FREM3P0C091 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FREM3P0C091 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FREM3P0C091 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
FREM3P0C091 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
FREM3P0C091 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.14■□□□□ 0.17
FREM3P0C091 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.14■□□□□ 0.17
FREM3P0C091 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FREM3P0C091 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
FREM3P0C091 POM121L3P-201ENST00000419331 1163 ntBASIC16.14■□□□□ 0.17
FREM3P0C091 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.14■□□□□ 0.17
FREM3P0C091 AL121912.1-201ENST00000603683 238 ntBASIC16.14■□□□□ 0.17
FREM3P0C091 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.14■□□□□ 0.17
FREM3P0C091 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
FREM3P0C091 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FREM3P0C091 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
FREM3P0C091 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
FREM3P0C091 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
FREM3P0C091 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
FREM3P0C091 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FREM3P0C091 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.14■□□□□ 0.17
FREM3P0C091 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
FREM3P0C091 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
FREM3P0C091 AC009949.1-201ENST00000623048 1830 ntBASIC16.13■□□□□ 0.17
FREM3P0C091 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FREM3P0C091 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
FREM3P0C091 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FREM3P0C091 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FREM3P0C091 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.13■□□□□ 0.17
FREM3P0C091 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FREM3P0C091 ABCD1P5-201ENST00000445663 754 ntBASIC16.13■□□□□ 0.17
FREM3P0C091 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
FREM3P0C091 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.13■□□□□ 0.17
FREM3P0C091 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.13■□□□□ 0.17
FREM3P0C091 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
FREM3P0C091 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.13■□□□□ 0.17
FREM3P0C091 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
FREM3P0C091 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
FREM3P0C091 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
FREM3P0C091 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
FREM3P0C091 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FREM3P0C091 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
FREM3P0C091 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.13■□□□□ 0.17
FREM3P0C091 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
FREM3P0C091 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FREM3P0C091 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
FREM3P0C091 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.13■□□□□ 0.17
FREM3P0C091 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.13■□□□□ 0.17
FREM3P0C091 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.13■□□□□ 0.17
FREM3P0C091 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.13■□□□□ 0.17
FREM3P0C091 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.13■□□□□ 0.17
FREM3P0C091 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FREM3P0C091 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
FREM3P0C091 AL591684.3-201ENST00000605187 298 ntBASIC16.13■□□□□ 0.17
FREM3P0C091 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.13■□□□□ 0.17
FREM3P0C091 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
FREM3P0C091 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.13■□□□□ 0.17
FREM3P0C091 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FREM3P0C091 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FREM3P0C091 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.12■□□□□ 0.17
FREM3P0C091 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.12■□□□□ 0.17
FREM3P0C091 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.12■□□□□ 0.17
FREM3P0C091 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.12■□□□□ 0.17
FREM3P0C091 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FREM3P0C091 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FREM3P0C091 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
FREM3P0C091 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.12■□□□□ 0.17
FREM3P0C091 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
FREM3P0C091 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
FREM3P0C091 AC007967.3-201ENST00000434308 558 ntBASIC16.12■□□□□ 0.17
FREM3P0C091 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.12■□□□□ 0.17
FREM3P0C091 AC018712.1-201ENST00000455767 687 ntBASIC16.12■□□□□ 0.17
FREM3P0C091 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms