Protein–RNA interactions for Protein: P09327

VIL1, Villin-1, humanhuman

Known RBP Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1P09327 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VIL1P09327 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC21.13■□□□□ 0.97
VIL1P09327 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
VIL1P09327 RNF34-208ENST00000555076 593 ntTSL 3 BASIC21.13■□□□□ 0.97
VIL1P09327 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC21.13■□□□□ 0.97
VIL1P09327 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
VIL1P09327 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VIL1P09327 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
VIL1P09327 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC21.13■□□□□ 0.97
VIL1P09327 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
VIL1P09327 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VIL1P09327 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VIL1P09327 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VIL1P09327 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
VIL1P09327 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
VIL1P09327 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC21.12■□□□□ 0.97
VIL1P09327 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
VIL1P09327 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC21.12■□□□□ 0.97
VIL1P09327 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VIL1P09327 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VIL1P09327 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC21.12■□□□□ 0.97
VIL1P09327 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
VIL1P09327 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
VIL1P09327 AC009336.1-201ENST00000608941 1553 ntBASIC21.12■□□□□ 0.97
VIL1P09327 LINC00982-205ENST00000420957 435 ntBASIC21.12■□□□□ 0.97
VIL1P09327 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC21.12■□□□□ 0.97
VIL1P09327 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC21.12■□□□□ 0.97
VIL1P09327 CITED2-204ENST00000618718 901 ntTSL 2 BASIC21.12■□□□□ 0.97
VIL1P09327 AC093028.1-201ENST00000622998 982 ntBASIC21.12■□□□□ 0.97
VIL1P09327 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
VIL1P09327 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VIL1P09327 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VIL1P09327 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VIL1P09327 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VIL1P09327 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
VIL1P09327 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
VIL1P09327 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VIL1P09327 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VIL1P09327 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VIL1P09327 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC21.11■□□□□ 0.97
VIL1P09327 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC21.11■□□□□ 0.97
VIL1P09327 TSEN15P1-201ENST00000423257 515 ntBASIC21.11■□□□□ 0.97
VIL1P09327 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC21.11■□□□□ 0.97
VIL1P09327 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC21.11■□□□□ 0.97
VIL1P09327 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
VIL1P09327 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
VIL1P09327 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC21.11■□□□□ 0.97
VIL1P09327 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
VIL1P09327 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
VIL1P09327 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
VIL1P09327 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
VIL1P09327 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC21.11■□□□□ 0.97
VIL1P09327 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC21.11■□□□□ 0.97
VIL1P09327 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC21.11■□□□□ 0.97
VIL1P09327 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC21.11■□□□□ 0.97
VIL1P09327 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VIL1P09327 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
VIL1P09327 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
VIL1P09327 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
VIL1P09327 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
VIL1P09327 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VIL1P09327 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
VIL1P09327 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
VIL1P09327 EFTUD1P1-204ENST00000560401 1798 ntBASIC21.1■□□□□ 0.97
VIL1P09327 AL096828.2-201ENST00000567259 1965 ntBASIC21.1■□□□□ 0.97
VIL1P09327 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VIL1P09327 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
VIL1P09327 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
VIL1P09327 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
VIL1P09327 CALY-203ENST00000368558 825 ntTSL 5 BASIC21.1■□□□□ 0.97
VIL1P09327 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC21.1■□□□□ 0.97
VIL1P09327 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC21.1■□□□□ 0.97
VIL1P09327 AC023141.13-201ENST00000604991 943 ntBASIC21.1■□□□□ 0.97
VIL1P09327 AC091812.2-201ENST00000619081 385 ntBASIC21.1■□□□□ 0.97
VIL1P09327 AL513210.1-201ENST00000629608 234 ntBASIC21.1■□□□□ 0.97
VIL1P09327 AC007064.4-201ENST00000637740 555 ntBASIC21.1■□□□□ 0.97
VIL1P09327 AC092902.6-201ENST00000641783 218 ntBASIC21.1■□□□□ 0.97
VIL1P09327 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
VIL1P09327 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC21.1■□□□□ 0.97
VIL1P09327 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VIL1P09327 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
VIL1P09327 HARS-201ENST00000307633 1780 ntTSL 2 BASIC21.1■□□□□ 0.97
VIL1P09327 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
VIL1P09327 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.1■□□□□ 0.97
VIL1P09327 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VIL1P09327 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VIL1P09327 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC21.09■□□□□ 0.97
VIL1P09327 BX276092.7-203ENST00000637198 1536 ntBASIC21.09■□□□□ 0.97
VIL1P09327 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
VIL1P09327 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
VIL1P09327 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC21.09■□□□□ 0.97
VIL1P09327 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC21.09■□□□□ 0.97
VIL1P09327 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
VIL1P09327 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC21.09■□□□□ 0.97
VIL1P09327 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC21.09■□□□□ 0.97
VIL1P09327 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
VIL1P09327 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.09■□□□□ 0.97
VIL1P09327 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
VIL1P09327 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.09■□□□□ 0.97
VIL1P09327 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms