Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRUB2O95900 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
TRUB2O95900 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRUB2O95900 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRUB2O95900 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
TRUB2O95900 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.65■□□□□ 0.58
TRUB2O95900 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRUB2O95900 BCL2-203ENST00000589955 5011 ntBASIC18.65■□□□□ 0.58
TRUB2O95900 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.65■□□□□ 0.58
TRUB2O95900 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRUB2O95900 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.58
TRUB2O95900 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.64■□□□□ 0.58
TRUB2O95900 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
TRUB2O95900 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TRUB2O95900 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRUB2O95900 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRUB2O95900 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRUB2O95900 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRUB2O95900 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRUB2O95900 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
TRUB2O95900 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRUB2O95900 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.64■□□□□ 0.57
TRUB2O95900 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
TRUB2O95900 AC005336.2-201ENST00000593183 939 ntBASIC18.64■□□□□ 0.57
TRUB2O95900 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.64■□□□□ 0.57
TRUB2O95900 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.64■□□□□ 0.57
TRUB2O95900 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.64■□□□□ 0.57
TRUB2O95900 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TRUB2O95900 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.64■□□□□ 0.57
TRUB2O95900 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRUB2O95900 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.64■□□□□ 0.57
TRUB2O95900 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRUB2O95900 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.63■□□□□ 0.57
TRUB2O95900 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRUB2O95900 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRUB2O95900 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRUB2O95900 AC009949.1-201ENST00000623048 1830 ntBASIC18.63■□□□□ 0.57
TRUB2O95900 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRUB2O95900 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRUB2O95900 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRUB2O95900 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRUB2O95900 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.63■□□□□ 0.57
TRUB2O95900 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TRUB2O95900 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TRUB2O95900 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRUB2O95900 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRUB2O95900 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.63■□□□□ 0.57
TRUB2O95900 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRUB2O95900 KRT17P6-201ENST00000453795 1220 ntBASIC18.63■□□□□ 0.57
TRUB2O95900 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRUB2O95900 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.63■□□□□ 0.57
TRUB2O95900 AC074051.2-201ENST00000565115 352 ntBASIC18.63■□□□□ 0.57
TRUB2O95900 AC012615.1-201ENST00000565797 1299 ntBASIC18.63■□□□□ 0.57
TRUB2O95900 AC116407.2-201ENST00000613639 860 ntBASIC18.63■□□□□ 0.57
TRUB2O95900 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TRUB2O95900 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRUB2O95900 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
TRUB2O95900 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRUB2O95900 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.63■□□□□ 0.57
TRUB2O95900 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.63■□□□□ 0.57
TRUB2O95900 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRUB2O95900 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRUB2O95900 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TRUB2O95900 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRUB2O95900 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRUB2O95900 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRUB2O95900 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRUB2O95900 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRUB2O95900 AL355312.1-201ENST00000407115 2176 ntBASIC18.62■□□□□ 0.57
TRUB2O95900 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
TRUB2O95900 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRUB2O95900 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRUB2O95900 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRUB2O95900 HCG11-201ENST00000411553 5696 ntBASIC18.62■□□□□ 0.57
TRUB2O95900 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRUB2O95900 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRUB2O95900 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRUB2O95900 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRUB2O95900 IGHV3-47-201ENST00000425060 335 ntBASIC18.62■□□□□ 0.57
TRUB2O95900 AC104819.1-201ENST00000504587 486 ntBASIC18.62■□□□□ 0.57
TRUB2O95900 KRT18P56-201ENST00000507275 550 ntBASIC18.62■□□□□ 0.57
TRUB2O95900 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.62■□□□□ 0.57
TRUB2O95900 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRUB2O95900 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.62■□□□□ 0.57
TRUB2O95900 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRUB2O95900 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRUB2O95900 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.62■□□□□ 0.57
TRUB2O95900 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRUB2O95900 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.62■□□□□ 0.57
TRUB2O95900 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRUB2O95900 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRUB2O95900 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRUB2O95900 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRUB2O95900 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRUB2O95900 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRUB2O95900 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
TRUB2O95900 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRUB2O95900 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRUB2O95900 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.61■□□□□ 0.57
TRUB2O95900 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms