Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.69■□□□□ 0.9
CDKL5O76039 LINC00304-203ENST00000565008 1864 ntBASIC20.69■□□□□ 0.9
CDKL5O76039 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
CDKL5O76039 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CDKL5O76039 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CDKL5O76039 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC20.69■□□□□ 0.9
CDKL5O76039 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CDKL5O76039 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.69■□□□□ 0.9
CDKL5O76039 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.69■□□□□ 0.9
CDKL5O76039 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.69■□□□□ 0.9
CDKL5O76039 HLA-J-201ENST00000462773 1622 ntBASIC20.69■□□□□ 0.9
CDKL5O76039 AC096633.1-201ENST00000422446 749 ntBASIC20.69■□□□□ 0.9
CDKL5O76039 RN7SL606P-201ENST00000472779 293 ntBASIC20.69■□□□□ 0.9
CDKL5O76039 FAM86EP-206ENST00000510506 987 ntBASIC20.69■□□□□ 0.9
CDKL5O76039 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.69■□□□□ 0.9
CDKL5O76039 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CDKL5O76039 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDKL5O76039 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDKL5O76039 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CDKL5O76039 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDKL5O76039 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDKL5O76039 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDKL5O76039 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
CDKL5O76039 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDKL5O76039 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CDKL5O76039 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDKL5O76039 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDKL5O76039 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CDKL5O76039 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
CDKL5O76039 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDKL5O76039 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.9
CDKL5O76039 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDKL5O76039 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDKL5O76039 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CDKL5O76039 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CDKL5O76039 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20.68■□□□□ 0.9
CDKL5O76039 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.68■□□□□ 0.9
CDKL5O76039 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDKL5O76039 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC20.68■□□□□ 0.9
CDKL5O76039 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CDKL5O76039 IGHV3-41-201ENST00000613121 348 ntBASIC20.68■□□□□ 0.9
CDKL5O76039 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.68■□□□□ 0.9
CDKL5O76039 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CDKL5O76039 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDKL5O76039 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.68■□□□□ 0.9
CDKL5O76039 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CDKL5O76039 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.68■□□□□ 0.9
CDKL5O76039 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.68■□□□□ 0.9
CDKL5O76039 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDKL5O76039 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDKL5O76039 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDKL5O76039 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDKL5O76039 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC20.67■□□□□ 0.9
CDKL5O76039 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDKL5O76039 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC20.67■□□□□ 0.9
CDKL5O76039 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.67■□□□□ 0.9
CDKL5O76039 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDKL5O76039 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDKL5O76039 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.67■□□□□ 0.9
CDKL5O76039 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDKL5O76039 BX276092.5-203ENST00000456199 560 ntBASIC20.67■□□□□ 0.9
CDKL5O76039 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.67■□□□□ 0.9
CDKL5O76039 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.67■□□□□ 0.9
CDKL5O76039 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20.67■□□□□ 0.9
CDKL5O76039 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC20.67■□□□□ 0.9
CDKL5O76039 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
CDKL5O76039 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.67■□□□□ 0.9
CDKL5O76039 AL121672.3-201ENST00000608644 468 ntBASIC20.67■□□□□ 0.9
CDKL5O76039 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDKL5O76039 AC124864.1-201ENST00000623408 392 ntBASIC20.67■□□□□ 0.9
CDKL5O76039 AC097374.2-201ENST00000618617 1306 ntBASIC20.67■□□□□ 0.9
CDKL5O76039 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDKL5O76039 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDKL5O76039 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
CDKL5O76039 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDKL5O76039 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDKL5O76039 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDKL5O76039 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDKL5O76039 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDKL5O76039 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDKL5O76039 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.66■□□□□ 0.9
CDKL5O76039 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDKL5O76039 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDKL5O76039 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
CDKL5O76039 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDKL5O76039 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDKL5O76039 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDKL5O76039 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDKL5O76039 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDKL5O76039 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.66■□□□□ 0.9
CDKL5O76039 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.66■□□□□ 0.9
CDKL5O76039 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDKL5O76039 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.66■□□□□ 0.9
CDKL5O76039 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.66■□□□□ 0.9
CDKL5O76039 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDKL5O76039 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC20.66■□□□□ 0.9
CDKL5O76039 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDKL5O76039 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDKL5O76039 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDKL5O76039 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms