Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CPNE3O75131 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CPNE3O75131 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE3O75131 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
CPNE3O75131 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE3O75131 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.09■□□□□ 0.33
CPNE3O75131 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.09■□□□□ 0.33
CPNE3O75131 AC106795.1-205ENST00000512851 1056 ntBASIC17.09■□□□□ 0.33
CPNE3O75131 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE3O75131 AC005336.2-201ENST00000593183 939 ntBASIC17.09■□□□□ 0.33
CPNE3O75131 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE3O75131 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE3O75131 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE3O75131 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE3O75131 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.09■□□□□ 0.33
CPNE3O75131 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE3O75131 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.09■□□□□ 0.33
CPNE3O75131 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.09■□□□□ 0.33
CPNE3O75131 PKD1P1-201ENST00000458669 6805 ntBASIC17.08■□□□□ 0.33
CPNE3O75131 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.08■□□□□ 0.33
CPNE3O75131 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CPNE3O75131 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.08■□□□□ 0.33
CPNE3O75131 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CPNE3O75131 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.08■□□□□ 0.33
CPNE3O75131 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CPNE3O75131 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CPNE3O75131 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CPNE3O75131 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.08■□□□□ 0.33
CPNE3O75131 OR6D1P-202ENST00000641007 5290 ntBASIC17.08■□□□□ 0.33
CPNE3O75131 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
CPNE3O75131 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CPNE3O75131 GMCL1P1-201ENST00000463439 1581 ntBASIC17.08■□□□□ 0.32
CPNE3O75131 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CPNE3O75131 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CPNE3O75131 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.08■□□□□ 0.32
CPNE3O75131 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPNE3O75131 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.08■□□□□ 0.32
CPNE3O75131 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.08■□□□□ 0.32
CPNE3O75131 AC009533.2-201ENST00000543664 586 ntBASIC17.08■□□□□ 0.32
CPNE3O75131 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.08■□□□□ 0.32
CPNE3O75131 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.08■□□□□ 0.32
CPNE3O75131 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.08■□□□□ 0.32
CPNE3O75131 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
CPNE3O75131 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPNE3O75131 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
CPNE3O75131 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CPNE3O75131 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CPNE3O75131 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CPNE3O75131 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPNE3O75131 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CPNE3O75131 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CPNE3O75131 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE3O75131 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.07■□□□□ 0.32
CPNE3O75131 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.07■□□□□ 0.32
CPNE3O75131 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE3O75131 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CPNE3O75131 TP73-AS1-210ENST00000637775 1455 ntBASIC17.07■□□□□ 0.32
CPNE3O75131 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.07■□□□□ 0.32
CPNE3O75131 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.07■□□□□ 0.32
CPNE3O75131 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE3O75131 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.07■□□□□ 0.32
CPNE3O75131 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE3O75131 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.07■□□□□ 0.32
CPNE3O75131 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE3O75131 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.07■□□□□ 0.32
CPNE3O75131 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE3O75131 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE3O75131 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
CPNE3O75131 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.07■□□□□ 0.32
CPNE3O75131 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.07■□□□□ 0.32
CPNE3O75131 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.07■□□□□ 0.32
CPNE3O75131 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.07■□□□□ 0.32
CPNE3O75131 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.07■□□□□ 0.32
CPNE3O75131 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.07■□□□□ 0.32
CPNE3O75131 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.07■□□□□ 0.32
CPNE3O75131 SLC25A6P4-201ENST00000586535 553 ntBASIC17.07■□□□□ 0.32
CPNE3O75131 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.07■□□□□ 0.32
CPNE3O75131 AC064862.7-201ENST00000604520 867 ntBASIC17.07■□□□□ 0.32
CPNE3O75131 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.07■□□□□ 0.32
CPNE3O75131 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.07■□□□□ 0.32
CPNE3O75131 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE3O75131 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE3O75131 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE3O75131 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.07■□□□□ 0.32
CPNE3O75131 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE3O75131 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.07■□□□□ 0.32
CPNE3O75131 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.07■□□□□ 0.32
CPNE3O75131 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.06■□□□□ 0.32
CPNE3O75131 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE3O75131 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CPNE3O75131 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE3O75131 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE3O75131 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE3O75131 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE3O75131 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE3O75131 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE3O75131 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
CPNE3O75131 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE3O75131 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE3O75131 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms