Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.34■□□□□ 0.53
COCHO43405 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.34■□□□□ 0.53
COCHO43405 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.34■□□□□ 0.53
COCHO43405 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COCHO43405 AF228730.7-201ENST00000641842 219 ntBASIC18.34■□□□□ 0.53
COCHO43405 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COCHO43405 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
COCHO43405 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.34■□□□□ 0.53
COCHO43405 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COCHO43405 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COCHO43405 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.33■□□□□ 0.53
COCHO43405 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COCHO43405 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
COCHO43405 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.33■□□□□ 0.53
COCHO43405 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
COCHO43405 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COCHO43405 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
COCHO43405 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COCHO43405 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
COCHO43405 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.33■□□□□ 0.53
COCHO43405 SIGLEC16-201ENST00000599858 1437 ntBASIC18.33■□□□□ 0.53
COCHO43405 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
COCHO43405 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
COCHO43405 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.33■□□□□ 0.53
COCHO43405 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COCHO43405 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
COCHO43405 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
COCHO43405 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.33■□□□□ 0.52
COCHO43405 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COCHO43405 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.33■□□□□ 0.52
COCHO43405 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.33■□□□□ 0.52
COCHO43405 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COCHO43405 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.33■□□□□ 0.52
COCHO43405 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.33■□□□□ 0.52
COCHO43405 AC012640.2-201ENST00000561606 901 ntBASIC18.33■□□□□ 0.52
COCHO43405 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.33■□□□□ 0.52
COCHO43405 AC109462.3-201ENST00000573934 613 ntBASIC18.33■□□□□ 0.52
COCHO43405 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.33■□□□□ 0.52
COCHO43405 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
COCHO43405 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.33■□□□□ 0.52
COCHO43405 AL022326.1-202ENST00000641533 845 ntBASIC18.33■□□□□ 0.52
COCHO43405 AC107918.4-202ENST00000641623 219 ntBASIC18.33■□□□□ 0.52
COCHO43405 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COCHO43405 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.33■□□□□ 0.52
COCHO43405 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
COCHO43405 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COCHO43405 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COCHO43405 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COCHO43405 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COCHO43405 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.33■□□□□ 0.52
COCHO43405 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.33■□□□□ 0.52
COCHO43405 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COCHO43405 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COCHO43405 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
COCHO43405 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COCHO43405 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COCHO43405 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COCHO43405 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COCHO43405 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COCHO43405 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COCHO43405 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.32■□□□□ 0.52
COCHO43405 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.32■□□□□ 0.52
COCHO43405 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COCHO43405 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
COCHO43405 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COCHO43405 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COCHO43405 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COCHO43405 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COCHO43405 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
COCHO43405 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COCHO43405 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
COCHO43405 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COCHO43405 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.32■□□□□ 0.52
COCHO43405 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.32■□□□□ 0.52
COCHO43405 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.32■□□□□ 0.52
COCHO43405 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.32■□□□□ 0.52
COCHO43405 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.32■□□□□ 0.52
COCHO43405 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.32■□□□□ 0.52
COCHO43405 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.32■□□□□ 0.52
COCHO43405 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COCHO43405 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COCHO43405 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.32■□□□□ 0.52
COCHO43405 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COCHO43405 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
COCHO43405 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COCHO43405 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
COCHO43405 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.32■□□□□ 0.52
COCHO43405 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
COCHO43405 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.31■□□□□ 0.52
COCHO43405 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COCHO43405 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.31■□□□□ 0.52
COCHO43405 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COCHO43405 HLA-J-201ENST00000462773 1622 ntBASIC18.31■□□□□ 0.52
COCHO43405 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
COCHO43405 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COCHO43405 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COCHO43405 AC020763.4-201ENST00000623414 4170 ntBASIC18.31■□□□□ 0.52
COCHO43405 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.31■□□□□ 0.52
COCHO43405 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.31■□□□□ 0.52
COCHO43405 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms