Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
PAX4O43316 SAPCD2P2-201ENST00000431719 1174 ntBASIC12.74□□□□□ -0.37
PAX4O43316 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
PAX4O43316 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PAX4O43316 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
PAX4O43316 AP003733.1-201ENST00000491725 852 ntBASIC12.74□□□□□ -0.37
PAX4O43316 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
PAX4O43316 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC12.74□□□□□ -0.37
PAX4O43316 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC12.74□□□□□ -0.37
PAX4O43316 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
PAX4O43316 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
PAX4O43316 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PAX4O43316 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PAX4O43316 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
PAX4O43316 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
PAX4O43316 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
PAX4O43316 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PAX4O43316 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PAX4O43316 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
PAX4O43316 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC12.74□□□□□ -0.37
PAX4O43316 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PAX4O43316 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
PAX4O43316 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PAX4O43316 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PAX4O43316 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PAX4O43316 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
PAX4O43316 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PAX4O43316 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PAX4O43316 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PAX4O43316 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PAX4O43316 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PAX4O43316 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
PAX4O43316 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC12.73□□□□□ -0.37
PAX4O43316 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PAX4O43316 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PAX4O43316 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC12.73□□□□□ -0.37
PAX4O43316 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PAX4O43316 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
PAX4O43316 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
PAX4O43316 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC12.73□□□□□ -0.37
PAX4O43316 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC12.73□□□□□ -0.37
PAX4O43316 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PAX4O43316 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
PAX4O43316 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PAX4O43316 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC12.73□□□□□ -0.37
PAX4O43316 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PAX4O43316 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PAX4O43316 LY6E-213ENST00000522528 606 ntTSL 3 BASIC12.73□□□□□ -0.37
PAX4O43316 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC12.73□□□□□ -0.37
PAX4O43316 PPOX-214ENST00000535223 664 ntTSL 3 BASIC12.73□□□□□ -0.37
PAX4O43316 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC12.73□□□□□ -0.37
PAX4O43316 NME3-204ENST00000563498 920 ntTSL 2 BASIC12.73□□□□□ -0.37
PAX4O43316 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC12.73□□□□□ -0.37
PAX4O43316 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
PAX4O43316 NAA38-203ENST00000575071 553 ntTSL 2 BASIC12.73□□□□□ -0.37
PAX4O43316 NTF6B-201ENST00000591913 560 ntBASIC12.73□□□□□ -0.37
PAX4O43316 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC12.73□□□□□ -0.37
PAX4O43316 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC12.73□□□□□ -0.37
PAX4O43316 LITAF-220ENST00000620789 692 ntTSL 5 BASIC12.73□□□□□ -0.37
PAX4O43316 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC12.73□□□□□ -0.37
PAX4O43316 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC12.73□□□□□ -0.37
PAX4O43316 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
PAX4O43316 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
PAX4O43316 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC12.73□□□□□ -0.37
PAX4O43316 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC12.73□□□□□ -0.37
PAX4O43316 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC12.73□□□□□ -0.37
PAX4O43316 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PAX4O43316 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
PAX4O43316 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PAX4O43316 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC12.73□□□□□ -0.37
PAX4O43316 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
PAX4O43316 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC12.73□□□□□ -0.37
PAX4O43316 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
PAX4O43316 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC12.73□□□□□ -0.37
PAX4O43316 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PAX4O43316 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PAX4O43316 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PAX4O43316 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
PAX4O43316 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PAX4O43316 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PAX4O43316 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC12.72□□□□□ -0.37
PAX4O43316 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PAX4O43316 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PAX4O43316 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC12.72□□□□□ -0.37
PAX4O43316 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PAX4O43316 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
PAX4O43316 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PAX4O43316 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
PAX4O43316 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC12.72□□□□□ -0.37
PAX4O43316 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
PAX4O43316 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PAX4O43316 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PAX4O43316 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
PAX4O43316 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
PAX4O43316 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PAX4O43316 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
PAX4O43316 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
PAX4O43316 DAP-202ENST00000432074 1048 ntTSL 2 BASIC12.72□□□□□ -0.37
PAX4O43316 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
PAX4O43316 AC113404.2-201ENST00000507884 177 ntBASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms