Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
CHD1O14646 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
CHD1O14646 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
CHD1O14646 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC28.49■■■□□ 2.15
CHD1O14646 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC28.49■■■□□ 2.15
CHD1O14646 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC28.49■■■□□ 2.15
CHD1O14646 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC28.49■■■□□ 2.15
CHD1O14646 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC28.49■■■□□ 2.15
CHD1O14646 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC28.49■■■□□ 2.15
CHD1O14646 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC28.49■■■□□ 2.15
CHD1O14646 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC28.49■■■□□ 2.15
CHD1O14646 AC100757.3-201ENST00000622361 1406 ntBASIC28.48■■■□□ 2.15
CHD1O14646 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
CHD1O14646 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC28.48■■■□□ 2.15
CHD1O14646 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC28.48■■■□□ 2.15
CHD1O14646 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC28.48■■■□□ 2.15
CHD1O14646 GATD1-206ENST00000526325 756 ntTSL 5 BASIC28.48■■■□□ 2.15
CHD1O14646 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC28.48■■■□□ 2.15
CHD1O14646 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC28.48■■■□□ 2.15
CHD1O14646 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC28.48■■■□□ 2.15
CHD1O14646 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
CHD1O14646 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC28.47■■■□□ 2.15
CHD1O14646 PI4KAP1-204ENST00000612579 1703 ntBASIC28.47■■■□□ 2.15
CHD1O14646 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC28.47■■■□□ 2.15
CHD1O14646 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC28.47■■■□□ 2.15
CHD1O14646 ESPNP-201ENST00000270691 2015 ntBASIC28.47■■■□□ 2.15
CHD1O14646 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
CHD1O14646 AL671277.1-201ENST00000429656 993 ntBASIC28.47■■■□□ 2.15
CHD1O14646 AC241585.1-201ENST00000433527 519 ntBASIC28.47■■■□□ 2.15
CHD1O14646 SPCS2P4-201ENST00000436160 681 ntBASIC28.47■■■□□ 2.15
CHD1O14646 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC28.47■■■□□ 2.15
CHD1O14646 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC28.47■■■□□ 2.15
CHD1O14646 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC28.47■■■□□ 2.15
CHD1O14646 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
CHD1O14646 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC28.47■■■□□ 2.15
CHD1O14646 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
CHD1O14646 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
CHD1O14646 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC28.46■■■□□ 2.15
CHD1O14646 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
CHD1O14646 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC28.46■■■□□ 2.15
CHD1O14646 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
CHD1O14646 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC28.46■■■□□ 2.15
CHD1O14646 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
CHD1O14646 HARS-203ENST00000431330 1774 ntTSL 2 BASIC28.46■■■□□ 2.15
CHD1O14646 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC28.46■■■□□ 2.15
CHD1O14646 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
CHD1O14646 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC28.46■■■□□ 2.15
CHD1O14646 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC28.46■■■□□ 2.15
CHD1O14646 AC100803.2-201ENST00000562459 1963 ntBASIC28.46■■■□□ 2.15
CHD1O14646 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC28.46■■■□□ 2.15
CHD1O14646 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
CHD1O14646 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
CHD1O14646 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
CHD1O14646 FAM185BP-201ENST00000443595 716 ntBASIC28.46■■■□□ 2.15
CHD1O14646 ACA64.2-201ENST00000459014 129 ntBASIC28.46■■■□□ 2.15
CHD1O14646 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC28.46■■■□□ 2.15
CHD1O14646 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC28.46■■■□□ 2.15
CHD1O14646 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC28.46■■■□□ 2.15
CHD1O14646 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC28.45■■■□□ 2.15
CHD1O14646 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
CHD1O14646 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
CHD1O14646 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
CHD1O14646 COBL-210ENST00000632460 1941 ntTSL 5 BASIC28.45■■■□□ 2.15
CHD1O14646 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC28.45■■■□□ 2.15
CHD1O14646 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC28.45■■■□□ 2.15
CHD1O14646 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC28.45■■■□□ 2.15
CHD1O14646 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
CHD1O14646 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
CHD1O14646 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
CHD1O14646 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
CHD1O14646 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
CHD1O14646 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC28.45■■■□□ 2.14
CHD1O14646 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC28.45■■■□□ 2.14
CHD1O14646 AC107918.2-201ENST00000530817 355 ntBASIC28.45■■■□□ 2.14
CHD1O14646 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC28.45■■■□□ 2.14
CHD1O14646 AC084121.4-201ENST00000641598 221 ntBASIC28.45■■■□□ 2.14
CHD1O14646 AF228730.8-201ENST00000642140 221 ntBASIC28.45■■■□□ 2.14
CHD1O14646 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
CHD1O14646 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC28.45■■■□□ 2.14
CHD1O14646 GMCL1P1-201ENST00000463439 1581 ntBASIC28.45■■■□□ 2.14
CHD1O14646 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
CHD1O14646 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC28.44■■■□□ 2.14
CHD1O14646 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
CHD1O14646 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC28.44■■■□□ 2.14
CHD1O14646 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
CHD1O14646 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC28.44■■■□□ 2.14
CHD1O14646 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC28.44■■■□□ 2.14
CHD1O14646 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
CHD1O14646 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC28.44■■■□□ 2.14
CHD1O14646 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
CHD1O14646 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC28.44■■■□□ 2.14
CHD1O14646 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC28.43■■■□□ 2.14
CHD1O14646 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC28.43■■■□□ 2.14
CHD1O14646 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC28.43■■■□□ 2.14
CHD1O14646 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC28.43■■■□□ 2.14
CHD1O14646 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC28.43■■■□□ 2.14
CHD1O14646 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
CHD1O14646 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC28.43■■■□□ 2.14
CHD1O14646 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC28.43■■■□□ 2.14
CHD1O14646 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms