Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TAF4O00268 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TAF4O00268 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TAF4O00268 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
TAF4O00268 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TAF4O00268 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TAF4O00268 HTR7P1-202ENST00000624664 4411 ntBASIC17.45■□□□□ 0.38
TAF4O00268 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TAF4O00268 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TAF4O00268 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TAF4O00268 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TAF4O00268 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TAF4O00268 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TAF4O00268 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TAF4O00268 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TAF4O00268 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TAF4O00268 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TAF4O00268 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TAF4O00268 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.44■□□□□ 0.38
TAF4O00268 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TAF4O00268 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
TAF4O00268 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.44■□□□□ 0.38
TAF4O00268 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.44■□□□□ 0.38
TAF4O00268 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.44■□□□□ 0.38
TAF4O00268 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
TAF4O00268 RPS2P28-201ENST00000314255 741 ntBASIC17.44■□□□□ 0.38
TAF4O00268 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.44■□□□□ 0.38
TAF4O00268 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TAF4O00268 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.44■□□□□ 0.38
TAF4O00268 METTL21AP1-201ENST00000438852 635 ntBASIC17.44■□□□□ 0.38
TAF4O00268 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.44■□□□□ 0.38
TAF4O00268 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
TAF4O00268 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TAF4O00268 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.44■□□□□ 0.38
TAF4O00268 AC104390.1-201ENST00000555663 520 ntBASIC17.44■□□□□ 0.38
TAF4O00268 AC040169.1-201ENST00000565382 521 ntBASIC17.44■□□□□ 0.38
TAF4O00268 AC011840.4-201ENST00000578471 627 ntBASIC17.44■□□□□ 0.38
TAF4O00268 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TAF4O00268 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TAF4O00268 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.44■□□□□ 0.38
TAF4O00268 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TAF4O00268 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TAF4O00268 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.44■□□□□ 0.38
TAF4O00268 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TAF4O00268 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TAF4O00268 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TAF4O00268 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TAF4O00268 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TAF4O00268 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TAF4O00268 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TAF4O00268 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.43■□□□□ 0.38
TAF4O00268 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.43■□□□□ 0.38
TAF4O00268 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.43■□□□□ 0.38
TAF4O00268 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
TAF4O00268 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TAF4O00268 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.43■□□□□ 0.38
TAF4O00268 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TAF4O00268 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TAF4O00268 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TAF4O00268 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TAF4O00268 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TAF4O00268 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TAF4O00268 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TAF4O00268 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TAF4O00268 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
TAF4O00268 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.43■□□□□ 0.38
TAF4O00268 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.43■□□□□ 0.38
TAF4O00268 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TAF4O00268 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.43■□□□□ 0.38
TAF4O00268 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TAF4O00268 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.43■□□□□ 0.38
TAF4O00268 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.43■□□□□ 0.38
TAF4O00268 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.43■□□□□ 0.38
TAF4O00268 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TAF4O00268 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TAF4O00268 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TAF4O00268 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.43■□□□□ 0.38
TAF4O00268 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TAF4O00268 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TAF4O00268 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TAF4O00268 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TAF4O00268 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TAF4O00268 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TAF4O00268 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TAF4O00268 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.43■□□□□ 0.38
TAF4O00268 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.43■□□□□ 0.38
TAF4O00268 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TAF4O00268 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TAF4O00268 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TAF4O00268 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
TAF4O00268 AC009237.14-201ENST00000609975 1594 ntBASIC17.42■□□□□ 0.38
TAF4O00268 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TAF4O00268 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TAF4O00268 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TAF4O00268 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.42■□□□□ 0.38
TAF4O00268 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
TAF4O00268 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TAF4O00268 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TAF4O00268 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TAF4O00268 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms