Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM235A6NFC5 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM235A6NFC5 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TMEM235A6NFC5 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM235A6NFC5 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.22■□□□□ 0.03
TMEM235A6NFC5 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM235A6NFC5 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
TMEM235A6NFC5 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM235A6NFC5 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM235A6NFC5 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.21■□□□□ 0.03
TMEM235A6NFC5 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM235A6NFC5 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM235A6NFC5 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.21■□□□□ 0.03
TMEM235A6NFC5 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM235A6NFC5 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM235A6NFC5 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM235A6NFC5 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC15.21■□□□□ 0.03
TMEM235A6NFC5 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM235A6NFC5 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM235A6NFC5 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
TMEM235A6NFC5 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC15.21■□□□□ 0.03
TMEM235A6NFC5 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM235A6NFC5 RPPH1-201ENST00000516869 333 ntBASIC15.21■□□□□ 0.03
TMEM235A6NFC5 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC15.21■□□□□ 0.03
TMEM235A6NFC5 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.21■□□□□ 0.03
TMEM235A6NFC5 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
TMEM235A6NFC5 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC15.21■□□□□ 0.03
TMEM235A6NFC5 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM235A6NFC5 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM235A6NFC5 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM235A6NFC5 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
TMEM235A6NFC5 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM235A6NFC5 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM235A6NFC5 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
TMEM235A6NFC5 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM235A6NFC5 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.21■□□□□ 0.03
TMEM235A6NFC5 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM235A6NFC5 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.02
TMEM235A6NFC5 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.21■□□□□ 0.02
TMEM235A6NFC5 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TMEM235A6NFC5 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.21■□□□□ 0.02
TMEM235A6NFC5 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
TMEM235A6NFC5 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TMEM235A6NFC5 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
TMEM235A6NFC5 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TMEM235A6NFC5 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
TMEM235A6NFC5 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
TMEM235A6NFC5 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TMEM235A6NFC5 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
TMEM235A6NFC5 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
TMEM235A6NFC5 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
TMEM235A6NFC5 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM235A6NFC5 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM235A6NFC5 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM235A6NFC5 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM235A6NFC5 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM235A6NFC5 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM235A6NFC5 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM235A6NFC5 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.2■□□□□ 0.02
TMEM235A6NFC5 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TMEM235A6NFC5 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM235A6NFC5 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM235A6NFC5 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM235A6NFC5 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
TMEM235A6NFC5 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.2■□□□□ 0.02
TMEM235A6NFC5 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM235A6NFC5 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC15.2■□□□□ 0.02
TMEM235A6NFC5 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC15.2■□□□□ 0.02
TMEM235A6NFC5 CRYGFP-201ENST00000418459 633 ntBASIC15.2■□□□□ 0.02
TMEM235A6NFC5 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC15.2■□□□□ 0.02
TMEM235A6NFC5 AC116562.2-201ENST00000507042 360 ntBASIC15.2■□□□□ 0.02
TMEM235A6NFC5 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM235A6NFC5 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC15.2■□□□□ 0.02
TMEM235A6NFC5 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC15.2■□□□□ 0.02
TMEM235A6NFC5 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC15.2■□□□□ 0.02
TMEM235A6NFC5 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM235A6NFC5 AC104390.1-201ENST00000555663 520 ntBASIC15.2■□□□□ 0.02
TMEM235A6NFC5 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC15.2■□□□□ 0.02
TMEM235A6NFC5 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC15.2■□□□□ 0.02
TMEM235A6NFC5 CR769767.2-201ENST00000622735 460 ntBASIC15.2■□□□□ 0.02
TMEM235A6NFC5 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.2■□□□□ 0.02
TMEM235A6NFC5 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.2■□□□□ 0.02
TMEM235A6NFC5 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM235A6NFC5 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM235A6NFC5 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM235A6NFC5 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
TMEM235A6NFC5 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM235A6NFC5 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM235A6NFC5 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM235A6NFC5 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.2■□□□□ 0.02
TMEM235A6NFC5 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
TMEM235A6NFC5 AC022898.2-201ENST00000616822 1312 ntBASIC15.19■□□□□ 0.02
TMEM235A6NFC5 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.19■□□□□ 0.02
TMEM235A6NFC5 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM235A6NFC5 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM235A6NFC5 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM235A6NFC5 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM235A6NFC5 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM235A6NFC5 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM235A6NFC5 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms