Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 NCF1C-201ENST00000438382 1427 ntBASIC15.58■□□□□ 0.08
MBD3L4A6NDZ8 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.58■□□□□ 0.08
MBD3L4A6NDZ8 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
MBD3L4A6NDZ8 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
MBD3L4A6NDZ8 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
MBD3L4A6NDZ8 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.58■□□□□ 0.08
MBD3L4A6NDZ8 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MBD3L4A6NDZ8 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
MBD3L4A6NDZ8 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MBD3L4A6NDZ8 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
MBD3L4A6NDZ8 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
MBD3L4A6NDZ8 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
MBD3L4A6NDZ8 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MBD3L4A6NDZ8 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MBD3L4A6NDZ8 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MBD3L4A6NDZ8 KRT18P13-201ENST00000400056 1290 ntBASIC15.57■□□□□ 0.08
MBD3L4A6NDZ8 MED15P5-201ENST00000423150 992 ntBASIC15.57■□□□□ 0.08
MBD3L4A6NDZ8 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.57■□□□□ 0.08
MBD3L4A6NDZ8 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
MBD3L4A6NDZ8 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.57■□□□□ 0.08
MBD3L4A6NDZ8 STK19B-204ENST00000512515 211 ntBASIC15.57■□□□□ 0.08
MBD3L4A6NDZ8 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
MBD3L4A6NDZ8 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.57■□□□□ 0.08
MBD3L4A6NDZ8 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
MBD3L4A6NDZ8 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.57■□□□□ 0.08
MBD3L4A6NDZ8 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MBD3L4A6NDZ8 AC140113.2-201ENST00000604370 208 ntBASIC15.57■□□□□ 0.08
MBD3L4A6NDZ8 AC004706.3-202ENST00000621574 984 ntBASIC15.57■□□□□ 0.08
MBD3L4A6NDZ8 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MBD3L4A6NDZ8 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.57■□□□□ 0.08
MBD3L4A6NDZ8 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
MBD3L4A6NDZ8 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
MBD3L4A6NDZ8 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
MBD3L4A6NDZ8 AC004408.2-201ENST00000623613 2777 ntBASIC15.57■□□□□ 0.08
MBD3L4A6NDZ8 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MBD3L4A6NDZ8 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
MBD3L4A6NDZ8 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
MBD3L4A6NDZ8 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MBD3L4A6NDZ8 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MBD3L4A6NDZ8 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC15.56■□□□□ 0.08
MBD3L4A6NDZ8 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MBD3L4A6NDZ8 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MBD3L4A6NDZ8 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
MBD3L4A6NDZ8 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MBD3L4A6NDZ8 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
MBD3L4A6NDZ8 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
MBD3L4A6NDZ8 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.56■□□□□ 0.08
MBD3L4A6NDZ8 MYCLP1-201ENST00000372451 1075 ntBASIC15.56■□□□□ 0.08
MBD3L4A6NDZ8 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
MBD3L4A6NDZ8 MIR940-201ENST00000401276 94 ntBASIC15.56■□□□□ 0.08
MBD3L4A6NDZ8 AC009947.1-201ENST00000444350 727 ntBASIC15.56■□□□□ 0.08
MBD3L4A6NDZ8 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
MBD3L4A6NDZ8 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.56■□□□□ 0.08
MBD3L4A6NDZ8 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
MBD3L4A6NDZ8 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.56■□□□□ 0.08
MBD3L4A6NDZ8 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MBD3L4A6NDZ8 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
MBD3L4A6NDZ8 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
MBD3L4A6NDZ8 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.56■□□□□ 0.08
MBD3L4A6NDZ8 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
MBD3L4A6NDZ8 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
MBD3L4A6NDZ8 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.56■□□□□ 0.08
MBD3L4A6NDZ8 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.56■□□□□ 0.08
MBD3L4A6NDZ8 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC15.56■□□□□ 0.08
MBD3L4A6NDZ8 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
MBD3L4A6NDZ8 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC15.56■□□□□ 0.08
MBD3L4A6NDZ8 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC15.56■□□□□ 0.08
MBD3L4A6NDZ8 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
MBD3L4A6NDZ8 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MBD3L4A6NDZ8 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MBD3L4A6NDZ8 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MBD3L4A6NDZ8 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MBD3L4A6NDZ8 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MBD3L4A6NDZ8 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC15.55■□□□□ 0.08
MBD3L4A6NDZ8 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MBD3L4A6NDZ8 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
MBD3L4A6NDZ8 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MBD3L4A6NDZ8 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MBD3L4A6NDZ8 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MBD3L4A6NDZ8 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
MBD3L4A6NDZ8 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC15.55■□□□□ 0.08
MBD3L4A6NDZ8 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MBD3L4A6NDZ8 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
MBD3L4A6NDZ8 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.55■□□□□ 0.08
MBD3L4A6NDZ8 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
MBD3L4A6NDZ8 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
MBD3L4A6NDZ8 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
MBD3L4A6NDZ8 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.55■□□□□ 0.08
MBD3L4A6NDZ8 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.55■□□□□ 0.08
MBD3L4A6NDZ8 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
MBD3L4A6NDZ8 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.55■□□□□ 0.08
MBD3L4A6NDZ8 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MBD3L4A6NDZ8 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MBD3L4A6NDZ8 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MBD3L4A6NDZ8 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.55■□□□□ 0.08
MBD3L4A6NDZ8 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MBD3L4A6NDZ8 AC005104.2-201ENST00000427818 678 ntBASIC15.55■□□□□ 0.08
MBD3L4A6NDZ8 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.55■□□□□ 0.08
MBD3L4A6NDZ8 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.55■□□□□ 0.08
MBD3L4A6NDZ8 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms