Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TRIM49BA6NDI0 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TRIM49BA6NDI0 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.62■□□□□ 0.73
TRIM49BA6NDI0 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM49BA6NDI0 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM49BA6NDI0 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM49BA6NDI0 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM49BA6NDI0 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM49BA6NDI0 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM49BA6NDI0 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.62■□□□□ 0.73
TRIM49BA6NDI0 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM49BA6NDI0 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM49BA6NDI0 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM49BA6NDI0 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM49BA6NDI0 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.61■□□□□ 0.73
TRIM49BA6NDI0 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM49BA6NDI0 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM49BA6NDI0 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.61■□□□□ 0.73
TRIM49BA6NDI0 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM49BA6NDI0 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.61■□□□□ 0.73
TRIM49BA6NDI0 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM49BA6NDI0 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM49BA6NDI0 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM49BA6NDI0 HOMER2P1-201ENST00000455653 964 ntBASIC19.61■□□□□ 0.73
TRIM49BA6NDI0 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
TRIM49BA6NDI0 AC083849.1-201ENST00000615227 514 ntBASIC19.61■□□□□ 0.73
TRIM49BA6NDI0 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
TRIM49BA6NDI0 AP001094.4-201ENST00000579008 2176 ntBASIC19.61■□□□□ 0.73
TRIM49BA6NDI0 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM49BA6NDI0 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM49BA6NDI0 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM49BA6NDI0 AC022211.2-201ENST00000585075 2527 ntBASIC19.61■□□□□ 0.73
TRIM49BA6NDI0 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.61■□□□□ 0.73
TRIM49BA6NDI0 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.61■□□□□ 0.73
TRIM49BA6NDI0 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM49BA6NDI0 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
TRIM49BA6NDI0 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
TRIM49BA6NDI0 LINC01311-201ENST00000565162 1445 ntBASIC19.6■□□□□ 0.73
TRIM49BA6NDI0 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM49BA6NDI0 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM49BA6NDI0 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TRIM49BA6NDI0 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM49BA6NDI0 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM49BA6NDI0 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM49BA6NDI0 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.6■□□□□ 0.73
TRIM49BA6NDI0 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.6■□□□□ 0.73
TRIM49BA6NDI0 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.6■□□□□ 0.73
TRIM49BA6NDI0 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM49BA6NDI0 AC009053.2-201ENST00000563701 2365 ntBASIC19.6■□□□□ 0.73
TRIM49BA6NDI0 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.6■□□□□ 0.73
TRIM49BA6NDI0 DDX43P3-201ENST00000441064 443 ntBASIC19.6■□□□□ 0.73
TRIM49BA6NDI0 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM49BA6NDI0 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM49BA6NDI0 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.6■□□□□ 0.73
TRIM49BA6NDI0 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
TRIM49BA6NDI0 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM49BA6NDI0 AC005332.3-201ENST00000589904 676 ntBASIC19.6■□□□□ 0.73
TRIM49BA6NDI0 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.6■□□□□ 0.73
TRIM49BA6NDI0 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM49BA6NDI0 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.6■□□□□ 0.73
TRIM49BA6NDI0 GPR32P1-201ENST00000601788 811 ntBASIC19.6■□□□□ 0.73
TRIM49BA6NDI0 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
TRIM49BA6NDI0 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM49BA6NDI0 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM49BA6NDI0 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM49BA6NDI0 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM49BA6NDI0 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM49BA6NDI0 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.6■□□□□ 0.73
TRIM49BA6NDI0 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
TRIM49BA6NDI0 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
TRIM49BA6NDI0 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.6■□□□□ 0.73
TRIM49BA6NDI0 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM49BA6NDI0 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
TRIM49BA6NDI0 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.6■□□□□ 0.73
TRIM49BA6NDI0 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TRIM49BA6NDI0 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.59■□□□□ 0.73
TRIM49BA6NDI0 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM49BA6NDI0 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.59■□□□□ 0.73
TRIM49BA6NDI0 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM49BA6NDI0 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM49BA6NDI0 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM49BA6NDI0 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM49BA6NDI0 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM49BA6NDI0 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM49BA6NDI0 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.59■□□□□ 0.73
TRIM49BA6NDI0 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM49BA6NDI0 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.59■□□□□ 0.73
TRIM49BA6NDI0 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.59■□□□□ 0.73
TRIM49BA6NDI0 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM49BA6NDI0 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.59■□□□□ 0.73
TRIM49BA6NDI0 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM49BA6NDI0 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.59■□□□□ 0.73
TRIM49BA6NDI0 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.59■□□□□ 0.73
TRIM49BA6NDI0 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.59■□□□□ 0.73
TRIM49BA6NDI0 RN7SL850P-201ENST00000579959 291 ntBASIC19.59■□□□□ 0.73
TRIM49BA6NDI0 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.59■□□□□ 0.73
TRIM49BA6NDI0 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.59■□□□□ 0.73
TRIM49BA6NDI0 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM49BA6NDI0 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.59■□□□□ 0.73
TRIM49BA6NDI0 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms