Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 RPS2P1-201ENST00000434010 821 ntBASIC19.04■□□□□ 0.64
SMIM28A0A1B0GU29 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.04■□□□□ 0.64
SMIM28A0A1B0GU29 BX005266.1-201ENST00000473402 457 ntBASIC19.04■□□□□ 0.64
SMIM28A0A1B0GU29 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.04■□□□□ 0.64
SMIM28A0A1B0GU29 MTDHP4-201ENST00000600287 670 ntBASIC19.04■□□□□ 0.64
SMIM28A0A1B0GU29 MIR7706-201ENST00000613747 67 ntBASIC19.04■□□□□ 0.64
SMIM28A0A1B0GU29 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SMIM28A0A1B0GU29 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.04■□□□□ 0.64
SMIM28A0A1B0GU29 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SMIM28A0A1B0GU29 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.04■□□□□ 0.64
SMIM28A0A1B0GU29 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.04■□□□□ 0.64
SMIM28A0A1B0GU29 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SMIM28A0A1B0GU29 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMIM28A0A1B0GU29 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SMIM28A0A1B0GU29 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.03■□□□□ 0.64
SMIM28A0A1B0GU29 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SMIM28A0A1B0GU29 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SMIM28A0A1B0GU29 AC004817.3-201ENST00000602957 2129 ntBASIC19.03■□□□□ 0.64
SMIM28A0A1B0GU29 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SMIM28A0A1B0GU29 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMIM28A0A1B0GU29 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMIM28A0A1B0GU29 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMIM28A0A1B0GU29 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SMIM28A0A1B0GU29 AC132938.5-201ENST00000624980 1813 ntBASIC19.03■□□□□ 0.64
SMIM28A0A1B0GU29 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SMIM28A0A1B0GU29 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SMIM28A0A1B0GU29 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.03■□□□□ 0.64
SMIM28A0A1B0GU29 SPDYE21P-201ENST00000413323 827 ntBASIC19.03■□□□□ 0.64
SMIM28A0A1B0GU29 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.03■□□□□ 0.64
SMIM28A0A1B0GU29 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMIM28A0A1B0GU29 AC120114.3-201ENST00000611923 658 ntBASIC19.03■□□□□ 0.64
SMIM28A0A1B0GU29 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.03■□□□□ 0.64
SMIM28A0A1B0GU29 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMIM28A0A1B0GU29 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.03■□□□□ 0.64
SMIM28A0A1B0GU29 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMIM28A0A1B0GU29 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
SMIM28A0A1B0GU29 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMIM28A0A1B0GU29 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.03■□□□□ 0.64
SMIM28A0A1B0GU29 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SMIM28A0A1B0GU29 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.03■□□□□ 0.64
SMIM28A0A1B0GU29 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.03■□□□□ 0.64
SMIM28A0A1B0GU29 AC243591.1-201ENST00000452967 1364 ntBASIC19.03■□□□□ 0.64
SMIM28A0A1B0GU29 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SMIM28A0A1B0GU29 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SMIM28A0A1B0GU29 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SMIM28A0A1B0GU29 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMIM28A0A1B0GU29 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.03■□□□□ 0.64
SMIM28A0A1B0GU29 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.02■□□□□ 0.64
SMIM28A0A1B0GU29 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SMIM28A0A1B0GU29 IL9RP2-201ENST00000423948 1312 ntBASIC19.02■□□□□ 0.64
SMIM28A0A1B0GU29 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMIM28A0A1B0GU29 AC020763.4-201ENST00000623414 4170 ntBASIC19.02■□□□□ 0.64
SMIM28A0A1B0GU29 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SMIM28A0A1B0GU29 SIGLEC16-201ENST00000599858 1437 ntBASIC19.02■□□□□ 0.64
SMIM28A0A1B0GU29 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.02■□□□□ 0.64
SMIM28A0A1B0GU29 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
SMIM28A0A1B0GU29 RPS2P28-201ENST00000314255 741 ntBASIC19.02■□□□□ 0.64
SMIM28A0A1B0GU29 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SMIM28A0A1B0GU29 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SMIM28A0A1B0GU29 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SMIM28A0A1B0GU29 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.02■□□□□ 0.64
SMIM28A0A1B0GU29 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.02■□□□□ 0.64
SMIM28A0A1B0GU29 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.02■□□□□ 0.64
SMIM28A0A1B0GU29 AC093909.1-201ENST00000504731 1122 ntBASIC19.02■□□□□ 0.64
SMIM28A0A1B0GU29 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.02■□□□□ 0.64
SMIM28A0A1B0GU29 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.02■□□□□ 0.64
SMIM28A0A1B0GU29 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.02■□□□□ 0.64
SMIM28A0A1B0GU29 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.02■□□□□ 0.64
SMIM28A0A1B0GU29 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMIM28A0A1B0GU29 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMIM28A0A1B0GU29 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
SMIM28A0A1B0GU29 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.02■□□□□ 0.63
SMIM28A0A1B0GU29 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SMIM28A0A1B0GU29 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SMIM28A0A1B0GU29 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.02■□□□□ 0.63
SMIM28A0A1B0GU29 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SMIM28A0A1B0GU29 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.02■□□□□ 0.63
SMIM28A0A1B0GU29 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SMIM28A0A1B0GU29 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMIM28A0A1B0GU29 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.01■□□□□ 0.63
SMIM28A0A1B0GU29 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.01■□□□□ 0.63
SMIM28A0A1B0GU29 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMIM28A0A1B0GU29 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMIM28A0A1B0GU29 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMIM28A0A1B0GU29 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SMIM28A0A1B0GU29 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
SMIM28A0A1B0GU29 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.01■□□□□ 0.63
SMIM28A0A1B0GU29 PRYP5-201ENST00000451909 266 ntBASIC19.01■□□□□ 0.63
SMIM28A0A1B0GU29 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.01■□□□□ 0.63
SMIM28A0A1B0GU29 OR7E14P-202ENST00000530490 1290 ntBASIC19.01■□□□□ 0.63
SMIM28A0A1B0GU29 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.01■□□□□ 0.63
SMIM28A0A1B0GU29 AC139887.3-201ENST00000568585 713 ntBASIC19.01■□□□□ 0.63
SMIM28A0A1B0GU29 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.01■□□□□ 0.63
SMIM28A0A1B0GU29 AC109462.3-201ENST00000573934 613 ntBASIC19.01■□□□□ 0.63
SMIM28A0A1B0GU29 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.01■□□□□ 0.63
SMIM28A0A1B0GU29 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.01■□□□□ 0.63
SMIM28A0A1B0GU29 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
SMIM28A0A1B0GU29 AL022326.1-202ENST00000641533 845 ntBASIC19.01■□□□□ 0.63
SMIM28A0A1B0GU29 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SMIM28A0A1B0GU29 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms