Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF103-CHMP3A0A140T963 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
RNF103-CHMP3A0A140T963 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
RNF103-CHMP3A0A140T963 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
RNF103-CHMP3A0A140T963 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF103-CHMP3A0A140T963 PKD1P5-201ENST00000532415 10291 ntBASIC17.19■□□□□ 0.34
RNF103-CHMP3A0A140T963 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF103-CHMP3A0A140T963 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RNF103-CHMP3A0A140T963 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RNF103-CHMP3A0A140T963 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
RNF103-CHMP3A0A140T963 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF103-CHMP3A0A140T963 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.19■□□□□ 0.34
RNF103-CHMP3A0A140T963 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF103-CHMP3A0A140T963 AC009065.1-201ENST00000564055 1225 ntBASIC17.19■□□□□ 0.34
RNF103-CHMP3A0A140T963 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF103-CHMP3A0A140T963 AC112497.1-201ENST00000624824 639 ntBASIC17.19■□□□□ 0.34
RNF103-CHMP3A0A140T963 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF103-CHMP3A0A140T963 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF103-CHMP3A0A140T963 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF103-CHMP3A0A140T963 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF103-CHMP3A0A140T963 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.19■□□□□ 0.34
RNF103-CHMP3A0A140T963 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RNF103-CHMP3A0A140T963 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF103-CHMP3A0A140T963 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.19■□□□□ 0.34
RNF103-CHMP3A0A140T963 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF103-CHMP3A0A140T963 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF103-CHMP3A0A140T963 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF103-CHMP3A0A140T963 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF103-CHMP3A0A140T963 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RNF103-CHMP3A0A140T963 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF103-CHMP3A0A140T963 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.18■□□□□ 0.34
RNF103-CHMP3A0A140T963 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.18■□□□□ 0.34
RNF103-CHMP3A0A140T963 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF103-CHMP3A0A140T963 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF103-CHMP3A0A140T963 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RNF103-CHMP3A0A140T963 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
RNF103-CHMP3A0A140T963 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF103-CHMP3A0A140T963 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
RNF103-CHMP3A0A140T963 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
RNF103-CHMP3A0A140T963 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.18■□□□□ 0.34
RNF103-CHMP3A0A140T963 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
RNF103-CHMP3A0A140T963 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF103-CHMP3A0A140T963 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF103-CHMP3A0A140T963 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.18■□□□□ 0.34
RNF103-CHMP3A0A140T963 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNF103-CHMP3A0A140T963 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.18■□□□□ 0.34
RNF103-CHMP3A0A140T963 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.18■□□□□ 0.34
RNF103-CHMP3A0A140T963 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.18■□□□□ 0.34
RNF103-CHMP3A0A140T963 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF103-CHMP3A0A140T963 AC010653.2-201ENST00000623505 997 ntBASIC17.18■□□□□ 0.34
RNF103-CHMP3A0A140T963 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.18■□□□□ 0.34
RNF103-CHMP3A0A140T963 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF103-CHMP3A0A140T963 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF103-CHMP3A0A140T963 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNF103-CHMP3A0A140T963 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.18■□□□□ 0.34
RNF103-CHMP3A0A140T963 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF103-CHMP3A0A140T963 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF103-CHMP3A0A140T963 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.18■□□□□ 0.34
RNF103-CHMP3A0A140T963 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF103-CHMP3A0A140T963 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF103-CHMP3A0A140T963 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.18■□□□□ 0.34
RNF103-CHMP3A0A140T963 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNF103-CHMP3A0A140T963 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
RNF103-CHMP3A0A140T963 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF103-CHMP3A0A140T963 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF103-CHMP3A0A140T963 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF103-CHMP3A0A140T963 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF103-CHMP3A0A140T963 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
RNF103-CHMP3A0A140T963 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
RNF103-CHMP3A0A140T963 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF103-CHMP3A0A140T963 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF103-CHMP3A0A140T963 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF103-CHMP3A0A140T963 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF103-CHMP3A0A140T963 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.17■□□□□ 0.34
RNF103-CHMP3A0A140T963 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF103-CHMP3A0A140T963 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RNF103-CHMP3A0A140T963 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF103-CHMP3A0A140T963 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF103-CHMP3A0A140T963 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF103-CHMP3A0A140T963 TSPY14P-201ENST00000303979 915 ntBASIC17.17■□□□□ 0.34
RNF103-CHMP3A0A140T963 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
RNF103-CHMP3A0A140T963 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
RNF103-CHMP3A0A140T963 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF103-CHMP3A0A140T963 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.17■□□□□ 0.34
RNF103-CHMP3A0A140T963 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.17■□□□□ 0.34
RNF103-CHMP3A0A140T963 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF103-CHMP3A0A140T963 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
RNF103-CHMP3A0A140T963 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF103-CHMP3A0A140T963 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF103-CHMP3A0A140T963 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF103-CHMP3A0A140T963 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF103-CHMP3A0A140T963 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF103-CHMP3A0A140T963 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF103-CHMP3A0A140T963 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF103-CHMP3A0A140T963 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF103-CHMP3A0A140T963 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
RNF103-CHMP3A0A140T963 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF103-CHMP3A0A140T963 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF103-CHMP3A0A140T963 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF103-CHMP3A0A140T963 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms