Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
IGHV4-28A0A0C4DH34 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
IGHV4-28A0A0C4DH34 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
IGHV4-28A0A0C4DH34 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
IGHV4-28A0A0C4DH34 DANCR-204ENST00000444958 709 ntTSL 3 BASIC12.86□□□□□ -0.35
IGHV4-28A0A0C4DH34 DUTP2-201ENST00000519164 463 ntBASIC12.86□□□□□ -0.35
IGHV4-28A0A0C4DH34 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC12.86□□□□□ -0.35
IGHV4-28A0A0C4DH34 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC12.86□□□□□ -0.35
IGHV4-28A0A0C4DH34 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
IGHV4-28A0A0C4DH34 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
IGHV4-28A0A0C4DH34 IGHV3OR16-7-201ENST00000604106 360 ntBASIC12.86□□□□□ -0.35
IGHV4-28A0A0C4DH34 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC12.86□□□□□ -0.35
IGHV4-28A0A0C4DH34 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
IGHV4-28A0A0C4DH34 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
IGHV4-28A0A0C4DH34 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
IGHV4-28A0A0C4DH34 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
IGHV4-28A0A0C4DH34 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
IGHV4-28A0A0C4DH34 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
IGHV4-28A0A0C4DH34 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
IGHV4-28A0A0C4DH34 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
IGHV4-28A0A0C4DH34 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
IGHV4-28A0A0C4DH34 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
IGHV4-28A0A0C4DH34 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
IGHV4-28A0A0C4DH34 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC12.86□□□□□ -0.35
IGHV4-28A0A0C4DH34 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
IGHV4-28A0A0C4DH34 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 CCS-201ENST00000310190 942 ntTSL 5 BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 RCN1P2-201ENST00000398357 915 ntBASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 FAAHP1-202ENST00000446499 1238 ntBASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 EMBP1-201ENST00000458200 901 ntBASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 COX5A-204ENST00000567270 579 ntTSL 3 BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 MIR5100-201ENST00000579544 119 ntBASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
IGHV4-28A0A0C4DH34 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
IGHV4-28A0A0C4DH34 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC12.84□□□□□ -0.35
IGHV4-28A0A0C4DH34 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
IGHV4-28A0A0C4DH34 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
IGHV4-28A0A0C4DH34 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
IGHV4-28A0A0C4DH34 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
IGHV4-28A0A0C4DH34 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC12.84□□□□□ -0.35
IGHV4-28A0A0C4DH34 KRT8P47-201ENST00000604727 1398 ntBASIC12.84□□□□□ -0.35
IGHV4-28A0A0C4DH34 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC12.84□□□□□ -0.35
IGHV4-28A0A0C4DH34 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
IGHV4-28A0A0C4DH34 TBC1D3P5-201ENST00000579401 1545 ntBASIC12.84□□□□□ -0.35
IGHV4-28A0A0C4DH34 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
IGHV4-28A0A0C4DH34 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
IGHV4-28A0A0C4DH34 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
IGHV4-28A0A0C4DH34 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms