Protein–RNA interactions for Protein: Q04338

VTI1, t-SNARE VTI1, yeastyeast

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTI1Q04338 FRE5YOR384W 2085 nt7.12□□□□□ -1.27
VTI1Q04338 RSP5YER125W 2430 nt7.11□□□□□ -1.27
VTI1Q04338 tG(GCC)BtG(GCC)B 71 nt7.11□□□□□ -1.27
VTI1Q04338 SUF16tG(GCC)C 71 nt7.11□□□□□ -1.27
VTI1Q04338 tG(GCC)D1tG(GCC)D1 71 nt7.11□□□□□ -1.27
VTI1Q04338 tG(GCC)D2tG(GCC)D2 71 nt7.11□□□□□ -1.27
VTI1Q04338 tG(GCC)EtG(GCC)E 71 nt7.11□□□□□ -1.27
VTI1Q04338 SUF20tG(GCC)F1 71 nt7.11□□□□□ -1.27
VTI1Q04338 tG(GCC)F2tG(GCC)F2 71 nt7.11□□□□□ -1.27
VTI1Q04338 tG(GCC)G1tG(GCC)G1 71 nt7.11□□□□□ -1.27
VTI1Q04338 tG(GCC)G2tG(GCC)G2 71 nt7.11□□□□□ -1.27
VTI1Q04338 tG(GCC)J1tG(GCC)J1 71 nt7.11□□□□□ -1.27
VTI1Q04338 SUF23tG(GCC)J2 71 nt7.11□□□□□ -1.27
VTI1Q04338 tG(GCC)MtG(GCC)M 71 nt7.11□□□□□ -1.27
VTI1Q04338 tG(GCC)O1tG(GCC)O1 71 nt7.11□□□□□ -1.27
VTI1Q04338 SUF17tG(GCC)O2 71 nt7.11□□□□□ -1.27
VTI1Q04338 tG(GCC)P1tG(GCC)P1 71 nt7.11□□□□□ -1.27
VTI1Q04338 tG(GCC)P2tG(GCC)P2 71 nt7.11□□□□□ -1.27
VTI1Q04338 YGL102CYGL102C 429 nt7.11□□□□□ -1.27
VTI1Q04338 SMX3YPR182W 261 nt7.11□□□□□ -1.27
VTI1Q04338 YDR415CYDR415C 1125 nt7.1□□□□□ -1.27
VTI1Q04338 HIS1YER055C 894 nt7.1□□□□□ -1.27
VTI1Q04338 MET8YBR213W 825 nt7.1□□□□□ -1.27
VTI1Q04338 APE4YHR113W 1473 nt7.1□□□□□ -1.27
VTI1Q04338 NMT1YLR195C 1368 nt7.09□□□□□ -1.27
VTI1Q04338 GDA1YEL042W 1557 nt7.09□□□□□ -1.27
VTI1Q04338 GAA1YLR088W 1845 nt7.09□□□□□ -1.27
VTI1Q04338 YHR020WYHR020W 2067 nt7.09□□□□□ -1.27
VTI1Q04338 YML079WYML079W 606 nt7.09□□□□□ -1.27
VTI1Q04338 CST26YBR042C 1194 nt7.09□□□□□ -1.27
VTI1Q04338 ERP2YAL007C 648 nt7.08□□□□□ -1.28
VTI1Q04338 HEM1YDR232W 1647 nt7.08□□□□□ -1.28
VTI1Q04338 SKY1YMR216C 2229 nt7.08□□□□□ -1.28
VTI1Q04338 ICP55YER078C 1536 nt7.07□□□□□ -1.28
VTI1Q04338 YPT1YFL038C 621 nt7.07□□□□□ -1.28
VTI1Q04338 PRI1YIR008C 1230 nt7.07□□□□□ -1.28
VTI1Q04338 YKR032WYKR032W 315 nt7.07□□□□□ -1.28
VTI1Q04338 YLR162WYLR162W 357 nt7.07□□□□□ -1.28
VTI1Q04338 SEC62YPL094C 825 nt7.07□□□□□ -1.28
VTI1Q04338 STT3YGL022W 2157 nt7.07□□□□□ -1.28
VTI1Q04338 CLN1YMR199W 1641 nt7.07□□□□□ -1.28
VTI1Q04338 AGP2YBR132C 1791 nt7.07□□□□□ -1.28
VTI1Q04338 PPM2YOL141W 2088 nt7.07□□□□□ -1.28
VTI1Q04338 HED1YDR014W-A 489 nt7.06□□□□□ -1.28
VTI1Q04338 CHS5YLR330W 2016 nt7.06□□□□□ -1.28
VTI1Q04338 MSC3YLR219W 2187 nt7.04□□□□□ -1.28
VTI1Q04338 RRP46YGR095C 672 nt7.04□□□□□ -1.28
VTI1Q04338 ATG36YJL185C 882 nt7.04□□□□□ -1.28
VTI1Q04338 CDC11YJR076C 1248 nt7.04□□□□□ -1.28
VTI1Q04338 YLL056CYLL056C 897 nt7.04□□□□□ -1.28
VTI1Q04338 SES1YDR023W 1389 nt7.04□□□□□ -1.28
VTI1Q04338 YPR204WYPR204W 3099 nt7.04□□□□□ -1.28
VTI1Q04338 FPR2YDR519W 408 nt7.03□□□□□ -1.28
VTI1Q04338 YAL019W-AYAL019W-A 570 nt7.03□□□□□ -1.28
VTI1Q04338 AIM33YML087C 939 nt7.03□□□□□ -1.28
VTI1Q04338 ERG10YPL028W 1197 nt7.03□□□□□ -1.28
VTI1Q04338 RIX7YLL034C 2514 nt7.03□□□□□ -1.28
VTI1Q04338 EDE1YBL047C 4146 nt7.03□□□□□ -1.28
VTI1Q04338 PHO3YBR092C 1404 nt7.02□□□□□ -1.29
VTI1Q04338 GUF1YLR289W 1938 nt7.02□□□□□ -1.29
VTI1Q04338 FBA1YKL060C 1080 nt7.02□□□□□ -1.29
VTI1Q04338 COX5AYNL052W 462 nt7.02□□□□□ -1.29
VTI1Q04338 MRPL19YNL185C 477 nt7.02□□□□□ -1.29
VTI1Q04338 TMA46YOR091W 1038 nt7.02□□□□□ -1.29
VTI1Q04338 SPS22YCL048W 1392 nt7.02□□□□□ -1.29
VTI1Q04338 ATG22YCL038C 1587 nt7.02□□□□□ -1.29
VTI1Q04338 SLX5YDL013W 1860 nt7.02□□□□□ -1.29
VTI1Q04338 PMT3YOR321W 2262 nt7.02□□□□□ -1.29
VTI1Q04338 EMP65YER140W 1671 nt7.01□□□□□ -1.29
VTI1Q04338 YFL052WYFL052W 1398 nt7.01□□□□□ -1.29
VTI1Q04338 SUF5tG(CCC)O 72 nt7.01□□□□□ -1.29
VTI1Q04338 EDC2YER035W 438 nt7.01□□□□□ -1.29
VTI1Q04338 HEM2YGL040C 1029 nt7.01□□□□□ -1.29
VTI1Q04338 DOT1YDR440W 1749 nt7.01□□□□□ -1.29
VTI1Q04338 ARG81YML099C 2643 nt7□□□□□ -1.29
VTI1Q04338 YBR113WYBR113W 483 nt7□□□□□ -1.29
VTI1Q04338 GLN3YER040W 2193 nt7□□□□□ -1.29
VTI1Q04338 COQ1YBR003W 1422 nt7□□□□□ -1.29
VTI1Q04338 HXT17YNR072W 1695 nt7□□□□□ -1.29
VTI1Q04338 SNU71YGR013W 1863 nt6.99□□□□□ -1.29
VTI1Q04338 MIA40YKL195W 1212 nt6.99□□□□□ -1.29
VTI1Q04338 DFR1YOR236W 636 nt6.99□□□□□ -1.29
VTI1Q04338 YPL041CYPL041C 624 nt6.99□□□□□ -1.29
VTI1Q04338 CMR1YDL156W 1569 nt6.99□□□□□ -1.29
VTI1Q04338 PUP2YGR253C 783 nt6.98□□□□□ -1.29
VTI1Q04338 NUP49YGL172W 1419 nt6.98□□□□□ -1.29
VTI1Q04338 THI2YBR240C 1353 nt6.97□□□□□ -1.29
VTI1Q04338 CCC2YDR270W 3015 nt6.97□□□□□ -1.29
VTI1Q04338 UTR2YEL040W 1404 nt6.97□□□□□ -1.29
VTI1Q04338 MSS1YMR023C 1581 nt6.97□□□□□ -1.29
VTI1Q04338 IRS4YKR019C 1848 nt6.97□□□□□ -1.29
VTI1Q04338 YJL163CYJL163C 1668 nt6.96□□□□□ -1.29
VTI1Q04338 GTT3YEL017W 1014 nt6.96□□□□□ -1.3
VTI1Q04338 SQT1YIR012W 1296 nt6.96□□□□□ -1.3
VTI1Q04338 YKL018C-AYKL018C-A 300 nt6.96□□□□□ -1.3
VTI1Q04338 SWD1YAR003W 1281 nt6.96□□□□□ -1.3
VTI1Q04338 IDP3YNL009W 1263 nt6.96□□□□□ -1.3
VTI1Q04338 FIT2YOR382W 462 nt6.96□□□□□ -1.3
VTI1Q04338 YPL250W-AYPL250W-A 288 nt6.96□□□□□ -1.3
VTI1Q04338 ERG12YMR208W 1332 nt6.96□□□□□ -1.3
Retrieved 100 of 7,029 protein–RNA pairs in 67.3 ms