Protein–RNA interactions for Protein: P78345

RPP38, Ribonuclease P protein subunit p38, humanhuman

Known RBP Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP38P78345 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
RPP38P78345 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
RPP38P78345 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RPP38P78345 MIR219A2-201ENST00000608502 1504 ntBASIC23.08■■□□□ 1.29
RPP38P78345 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC23.08■■□□□ 1.29
RPP38P78345 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
RPP38P78345 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RPP38P78345 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.08■■□□□ 1.29
RPP38P78345 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RPP38P78345 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.08■■□□□ 1.28
RPP38P78345 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.08■■□□□ 1.28
RPP38P78345 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
RPP38P78345 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.07■■□□□ 1.28
RPP38P78345 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RPP38P78345 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RPP38P78345 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RPP38P78345 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RPP38P78345 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RPP38P78345 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.06■■□□□ 1.28
RPP38P78345 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RPP38P78345 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
RPP38P78345 AC145676.1-201ENST00000514988 2004 ntBASIC23.05■■□□□ 1.28
RPP38P78345 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC23.05■■□□□ 1.28
RPP38P78345 AC126177.7-201ENST00000547904 679 ntBASIC23.05■■□□□ 1.28
RPP38P78345 AC018358.1-201ENST00000631079 1402 ntBASIC23.05■■□□□ 1.28
RPP38P78345 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
RPP38P78345 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RPP38P78345 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RPP38P78345 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RPP38P78345 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.04■■□□□ 1.28
RPP38P78345 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
RPP38P78345 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC23.04■■□□□ 1.28
RPP38P78345 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.04■■□□□ 1.28
RPP38P78345 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.04■■□□□ 1.28
RPP38P78345 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RPP38P78345 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
RPP38P78345 AC020928.2-201ENST00000588717 2197 ntBASIC23.04■■□□□ 1.28
RPP38P78345 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RPP38P78345 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RPP38P78345 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
RPP38P78345 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC23.03■■□□□ 1.28
RPP38P78345 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
RPP38P78345 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
RPP38P78345 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RPP38P78345 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
RPP38P78345 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RPP38P78345 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RPP38P78345 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RPP38P78345 SRP68-213ENST00000629930 165 ntTSL 5 BASIC23.02■■□□□ 1.28
RPP38P78345 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
RPP38P78345 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RPP38P78345 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
RPP38P78345 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RPP38P78345 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC23.01■■□□□ 1.27
RPP38P78345 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RPP38P78345 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
RPP38P78345 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23■■□□□ 1.27
RPP38P78345 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
RPP38P78345 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RPP38P78345 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC22.99■■□□□ 1.27
RPP38P78345 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
RPP38P78345 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
RPP38P78345 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RPP38P78345 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RPP38P78345 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC22.98■■□□□ 1.27
RPP38P78345 ABHD17AP3-201ENST00000503096 1137 ntBASIC22.98■■□□□ 1.27
RPP38P78345 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
RPP38P78345 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC22.98■■□□□ 1.27
RPP38P78345 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
RPP38P78345 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RPP38P78345 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RPP38P78345 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RPP38P78345 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RPP38P78345 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
RPP38P78345 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.97■■□□□ 1.27
RPP38P78345 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RPP38P78345 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RPP38P78345 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RPP38P78345 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.96■■□□□ 1.27
RPP38P78345 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
RPP38P78345 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
RPP38P78345 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
RPP38P78345 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
RPP38P78345 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC22.95■■□□□ 1.26
RPP38P78345 CEP120-209ENST00000515110 606 ntTSL 3 BASIC22.95■■□□□ 1.26
RPP38P78345 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
RPP38P78345 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RPP38P78345 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
RPP38P78345 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RPP38P78345 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RPP38P78345 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RPP38P78345 HES4-202ENST00000428771 1040 ntTSL 2 BASIC22.94■■□□□ 1.26
RPP38P78345 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RPP38P78345 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.94■■□□□ 1.26
RPP38P78345 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.93■■□□□ 1.26
RPP38P78345 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
RPP38P78345 AC022413.1-201ENST00000624602 984 ntBASIC22.93■■□□□ 1.26
RPP38P78345 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
RPP38P78345 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
RPP38P78345 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 400.7 ms