Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 TOS6YNL300W 309 nt6.91□□□□□ -1.3
YNL040WP53960 ADH5YBR145W 1056 nt6.91□□□□□ -1.3
YNL040WP53960 MRPL35YDR322W 1104 nt6.9□□□□□ -1.3
YNL040WP53960 YJR107WYJR107W 987 nt6.9□□□□□ -1.3
YNL040WP53960 LSC1YOR142W 990 nt6.9□□□□□ -1.3
YNL040WP53960 ARG81YML099C 2643 nt6.9□□□□□ -1.31
YNL040WP53960 LCL3YGL085W 825 nt6.89□□□□□ -1.31
YNL040WP53960 IRC11YOR013W 471 nt6.89□□□□□ -1.31
YNL040WP53960 ERG12YMR208W 1332 nt6.89□□□□□ -1.31
YNL040WP53960 YPR204WYPR204W 3099 nt6.88□□□□□ -1.31
YNL040WP53960 PPM2YOL141W 2088 nt6.88□□□□□ -1.31
YNL040WP53960 COQ1YBR003W 1422 nt6.88□□□□□ -1.31
YNL040WP53960 ASF1YJL115W 840 nt6.88□□□□□ -1.31
YNL040WP53960 PHO3YBR092C 1404 nt6.87□□□□□ -1.31
YNL040WP53960 FMO1YHR176W 1299 nt6.87□□□□□ -1.31
YNL040WP53960 YKL102CYKL102C 306 nt6.87□□□□□ -1.31
YNL040WP53960 YNL092WYNL092W 1203 nt6.87□□□□□ -1.31
YNL040WP53960 RNH1YMR234W 1047 nt6.86□□□□□ -1.31
YNL040WP53960 STT3YGL022W 2157 nt6.86□□□□□ -1.31
YNL040WP53960 tG(GCC)BtG(GCC)B 71 nt6.85□□□□□ -1.31
YNL040WP53960 SUF16tG(GCC)C 71 nt6.85□□□□□ -1.31
YNL040WP53960 tG(GCC)D1tG(GCC)D1 71 nt6.85□□□□□ -1.31
YNL040WP53960 tG(GCC)D2tG(GCC)D2 71 nt6.85□□□□□ -1.31
YNL040WP53960 tG(GCC)EtG(GCC)E 71 nt6.85□□□□□ -1.31
YNL040WP53960 SUF20tG(GCC)F1 71 nt6.85□□□□□ -1.31
YNL040WP53960 tG(GCC)F2tG(GCC)F2 71 nt6.85□□□□□ -1.31
YNL040WP53960 tG(GCC)G1tG(GCC)G1 71 nt6.85□□□□□ -1.31
YNL040WP53960 tG(GCC)G2tG(GCC)G2 71 nt6.85□□□□□ -1.31
YNL040WP53960 tG(GCC)J1tG(GCC)J1 71 nt6.85□□□□□ -1.31
YNL040WP53960 SUF23tG(GCC)J2 71 nt6.85□□□□□ -1.31
YNL040WP53960 tG(GCC)MtG(GCC)M 71 nt6.85□□□□□ -1.31
YNL040WP53960 tG(GCC)O1tG(GCC)O1 71 nt6.85□□□□□ -1.31
YNL040WP53960 SUF17tG(GCC)O2 71 nt6.85□□□□□ -1.31
YNL040WP53960 tG(GCC)P1tG(GCC)P1 71 nt6.85□□□□□ -1.31
YNL040WP53960 tG(GCC)P2tG(GCC)P2 71 nt6.85□□□□□ -1.31
YNL040WP53960 MRPL23YOR150W 492 nt6.85□□□□□ -1.31
YNL040WP53960 PMP3YDR276C 168 nt6.84□□□□□ -1.31
YNL040WP53960 HEM2YGL040C 1029 nt6.84□□□□□ -1.31
YNL040WP53960 GCN3YKR026C 918 nt6.84□□□□□ -1.31
YNL040WP53960 SAL1YNL083W 1485 nt6.84□□□□□ -1.31
YNL040WP53960 YCR061WYCR061W 1896 nt6.83□□□□□ -1.32
YNL040WP53960 HEM1YDR232W 1647 nt6.83□□□□□ -1.32
YNL040WP53960 CIR2YOR356W 1896 nt6.83□□□□□ -1.32
YNL040WP53960 HIS1YER055C 894 nt6.83□□□□□ -1.32
YNL040WP53960 ATG36YJL185C 882 nt6.83□□□□□ -1.32
YNL040WP53960 TAF9YMR236W 474 nt6.83□□□□□ -1.32
YNL040WP53960 YEL023CYEL023C 2049 nt6.83□□□□□ -1.32
YNL040WP53960 COX10YPL172C 1389 nt6.82□□□□□ -1.32
YNL040WP53960 STF1YDL130W-A 261 nt6.82□□□□□ -1.32
YNL040WP53960 YDR415CYDR415C 1125 nt6.82□□□□□ -1.32
YNL040WP53960 AIM33YML087C 939 nt6.82□□□□□ -1.32
YNL040WP53960 CUE4YML101C 354 nt6.82□□□□□ -1.32
YNL040WP53960 MRPS18YNL306W 654 nt6.82□□□□□ -1.32
YNL040WP53960 DFR1YOR236W 636 nt6.82□□□□□ -1.32
YNL040WP53960 GTT3YEL017W 1014 nt6.81□□□□□ -1.32
YNL040WP53960 YIL029W-AYIL029W-A 372 nt6.81□□□□□ -1.32
YNL040WP53960 YRB2YIL063C 984 nt6.81□□□□□ -1.32
YNL040WP53960 COX5AYNL052W 462 nt6.81□□□□□ -1.32
YNL040WP53960 SES1YDR023W 1389 nt6.81□□□□□ -1.32
YNL040WP53960 YHK8YHR048W 1545 nt6.81□□□□□ -1.32
YNL040WP53960 YPT1YFL038C 621 nt6.8□□□□□ -1.32
YNL040WP53960 RFC4YOL094C 972 nt6.8□□□□□ -1.32
YNL040WP53960 GUT1YHL032C 2130 nt6.79□□□□□ -1.32
YNL040WP53960 VMA2YBR127C 1554 nt6.79□□□□□ -1.32
YNL040WP53960 GCG1YER163C 699 nt6.79□□□□□ -1.32
YNL040WP53960 YJR154WYJR154W 1041 nt6.79□□□□□ -1.32
YNL040WP53960 MIA40YKL195W 1212 nt6.79□□□□□ -1.32
YNL040WP53960 DID2YKR035W-A 615 nt6.79□□□□□ -1.32
YNL040WP53960 ILV6YCL009C 930 nt6.79□□□□□ -1.32
YNL040WP53960 MLS1YNL117W 1665 nt6.79□□□□□ -1.32
YNL040WP53960 EDE1YBL047C 4146 nt6.78□□□□□ -1.32
YNL040WP53960 YHR213W-BYHR213W-B 300 nt6.78□□□□□ -1.32
YNL040WP53960 YKR032WYKR032W 315 nt6.78□□□□□ -1.32
YNL040WP53960 YAR064WYAR064W 300 nt6.78□□□□□ -1.32
YNL040WP53960 AVT4YNL101W 2142 nt6.77□□□□□ -1.33
YNL040WP53960 PMT3YOR321W 2262 nt6.77□□□□□ -1.33
YNL040WP53960 YJR146WYJR146W 354 nt6.76□□□□□ -1.33
YNL040WP53960 FBA1YKL060C 1080 nt6.76□□□□□ -1.33
YNL040WP53960 PEX13YLR191W 1161 nt6.76□□□□□ -1.33
YNL040WP53960 KNS1YLL019C 2214 nt6.75□□□□□ -1.33
YNL040WP53960 SUF5tG(CCC)O 72 nt6.75□□□□□ -1.33
YNL040WP53960 OM45YIL136W 1182 nt6.75□□□□□ -1.33
YNL040WP53960 AIM20YIL158W 615 nt6.75□□□□□ -1.33
YNL040WP53960 YUR1YJL139C 1287 nt6.75□□□□□ -1.33
YNL040WP53960 YPL250W-AYPL250W-A 288 nt6.75□□□□□ -1.33
YNL040WP53960 YPL257WYPL257W 582 nt6.75□□□□□ -1.33
YNL040WP53960 YJL045WYJL045W 1905 nt6.75□□□□□ -1.33
YNL040WP53960 UTR2YEL040W 1404 nt6.75□□□□□ -1.33
YNL040WP53960 HEL1YKR017C 1656 nt6.74□□□□□ -1.33
YNL040WP53960 ERG8YMR220W 1356 nt6.74□□□□□ -1.33
YNL040WP53960 FAL1YDR021W 1200 nt6.74□□□□□ -1.33
YNL040WP53960 POR2YIL114C 846 nt6.74□□□□□ -1.33
YNL040WP53960 TSR2YLR435W 618 nt6.74□□□□□ -1.33
YNL040WP53960 GPD2YOL059W 1323 nt6.74□□□□□ -1.33
YNL040WP53960 CCT8YJL008C 1707 nt6.73□□□□□ -1.33
YNL040WP53960 RBS1YDL189W 1374 nt6.73□□□□□ -1.33
YNL040WP53960 IMG1YCR046C 510 nt6.73□□□□□ -1.33
YNL040WP53960 VMA3YEL027W 483 nt6.73□□□□□ -1.33
YNL040WP53960 MHT1YLL062C 975 nt6.73□□□□□ -1.33
YNL040WP53960 KSH1YNL024C-A 219 nt6.73□□□□□ -1.33
Retrieved 100 of 7,029 protein–RNA pairs in 27.3 ms