Protein–RNA interactions for Protein: P40968

CDC40, Pre-mRNA-processing factor 17, yeastyeast

Predicted RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC40P40968 MRP1YDR347W 966 nt5.55□□□□□ -1.52
CDC40P40968 RGD2YFL047W 2145 nt5.55□□□□□ -1.52
CDC40P40968 AIM33YML087C 939 nt5.55□□□□□ -1.52
CDC40P40968 YMR074CYMR074C 438 nt5.55□□□□□ -1.52
CDC40P40968 YOL099CYOL099C 492 nt5.55□□□□□ -1.52
CDC40P40968 YPR204WYPR204W 3099 nt5.55□□□□□ -1.52
CDC40P40968 YMR155WYMR155W 1644 nt5.55□□□□□ -1.52
CDC40P40968 PEX31YGR004W 1389 nt5.55□□□□□ -1.52
CDC40P40968 ARO10YDR380W 1908 nt5.54□□□□□ -1.52
CDC40P40968 THI4YGR144W 981 nt5.54□□□□□ -1.52
CDC40P40968 DLD1YDL174C 1764 nt5.54□□□□□ -1.52
CDC40P40968 PXL1YKR090W 2121 nt5.54□□□□□ -1.52
CDC40P40968 SET5YHR207C 1581 nt5.54□□□□□ -1.52
CDC40P40968 YEL020CYEL020C 1683 nt5.53□□□□□ -1.52
CDC40P40968 ACS1YAL054C 2142 nt5.53□□□□□ -1.52
CDC40P40968 TEL2YGR099W 2067 nt5.53□□□□□ -1.52
CDC40P40968 GET2YER083C 858 nt5.53□□□□□ -1.52
CDC40P40968 YGR127WYGR127W 939 nt5.53□□□□□ -1.52
CDC40P40968 YOR343CYOR343C 327 nt5.53□□□□□ -1.52
CDC40P40968 DUG1YFR044C 1446 nt5.53□□□□□ -1.52
CDC40P40968 SKI2YLR398C 3864 nt5.53□□□□□ -1.52
CDC40P40968 ALT2YDR111C 1524 nt5.53□□□□□ -1.52
CDC40P40968 MSG5YNL053W 1470 nt5.52□□□□□ -1.53
CDC40P40968 PAP1YKR002W 1707 nt5.52□□□□□ -1.53
CDC40P40968 YJL144WYJL144W 315 nt5.52□□□□□ -1.53
CDC40P40968 CIS3YJL158C 684 nt5.52□□□□□ -1.53
CDC40P40968 PEX13YLR191W 1161 nt5.52□□□□□ -1.53
CDC40P40968 GDH1YOR375C 1365 nt5.52□□□□□ -1.53
CDC40P40968 CSC1YLR241W 2349 nt5.52□□□□□ -1.53
CDC40P40968 snR82snR82 268 nt5.51□□□□□ -1.53
CDC40P40968 ERG27YLR100W 1044 nt5.51□□□□□ -1.53
CDC40P40968 NAF1YNL124W 1479 nt5.51□□□□□ -1.53
CDC40P40968 YNL247WYNL247W 2304 nt5.51□□□□□ -1.53
CDC40P40968 PAC2YER007W 1557 nt5.5□□□□□ -1.53
CDC40P40968 FAT3YKL187C 2253 nt5.5□□□□□ -1.53
CDC40P40968 RGD1YBR260C 2001 nt5.5□□□□□ -1.53
CDC40P40968 CTA1YDR256C 1548 nt5.5□□□□□ -1.53
CDC40P40968 SUF3tG(CCC)D 72 nt5.5□□□□□ -1.53
CDC40P40968 THR1YHR025W 1074 nt5.5□□□□□ -1.53
CDC40P40968 YIR017W-AYIR017W-A 600 nt5.5□□□□□ -1.53
CDC40P40968 TAD2YJL035C 753 nt5.5□□□□□ -1.53
CDC40P40968 YNL108CYNL108C 813 nt5.5□□□□□ -1.53
CDC40P40968 PAU21YOR394W 495 nt5.5□□□□□ -1.53
CDC40P40968 PAU22YPL282C 495 nt5.5□□□□□ -1.53
CDC40P40968 BPL1YDL141W 2073 nt5.5□□□□□ -1.53
CDC40P40968 IMA5YJL216C 1746 nt5.5□□□□□ -1.53
CDC40P40968 SUB2YDL084W 1341 nt5.49□□□□□ -1.53
CDC40P40968 TUF1YOR187W 1314 nt5.49□□□□□ -1.53
CDC40P40968 UTR5YEL035C 501 nt5.49□□□□□ -1.53
CDC40P40968 SOH1YGL127C 384 nt5.49□□□□□ -1.53
CDC40P40968 ADH5YBR145W 1056 nt5.49□□□□□ -1.53
CDC40P40968 AFG1YEL052W 1530 nt5.48□□□□□ -1.53
CDC40P40968 GUP2YPL189W 1830 nt5.48□□□□□ -1.53
CDC40P40968 PMT3YOR321W 2262 nt5.48□□□□□ -1.53
CDC40P40968 YIL168WYIL168W 384 nt5.48□□□□□ -1.53
CDC40P40968 REC114YMR133W 1287 nt5.48□□□□□ -1.53
CDC40P40968 ADA2YDR448W 1305 nt5.48□□□□□ -1.53
CDC40P40968 SES1YDR023W 1389 nt5.47□□□□□ -1.53
CDC40P40968 GEX1YCL073C 1848 nt5.47□□□□□ -1.53
CDC40P40968 BUD20YLR074C 501 nt5.47□□□□□ -1.53
CDC40P40968 GEX2YKR106W 1848 nt5.46□□□□□ -1.53
CDC40P40968 TPO3YPR156C 1869 nt5.46□□□□□ -1.54
CDC40P40968 PPM1YDR435C 987 nt5.46□□□□□ -1.54
CDC40P40968 TDH1YJL052W 999 nt5.46□□□□□ -1.54
CDC40P40968 YAL016C-AYAL016C-A 315 nt5.46□□□□□ -1.54
CDC40P40968 YJR107WYJR107W 987 nt5.46□□□□□ -1.54
CDC40P40968 CUE4YML101C 354 nt5.46□□□□□ -1.54
CDC40P40968 COX5AYNL052W 462 nt5.46□□□□□ -1.54
CDC40P40968 AIM17YHL021C 1398 nt5.45□□□□□ -1.54
CDC40P40968 RRP43YCR035C 1185 nt5.45□□□□□ -1.54
CDC40P40968 HPT1YDR399W 666 nt5.45□□□□□ -1.54
CDC40P40968 HEM2YGL040C 1029 nt5.45□□□□□ -1.54
CDC40P40968 ICS3YJL077C 396 nt5.45□□□□□ -1.54
CDC40P40968 JJJ3YJR097W 519 nt5.45□□□□□ -1.54
CDC40P40968 ASR1YPR093C 867 nt5.45□□□□□ -1.54
CDC40P40968 NOP7YGR103W 1818 nt5.45□□□□□ -1.54
CDC40P40968 STE13YOR219C 2796 nt5.45□□□□□ -1.54
CDC40P40968 KTR5YNL029C 1569 nt5.45□□□□□ -1.54
CDC40P40968 YPL247CYPL247C 1572 nt5.45□□□□□ -1.54
CDC40P40968 MIP1YOR330C 3765 nt5.45□□□□□ -1.54
CDC40P40968 SPS1YDR523C 1473 nt5.45□□□□□ -1.54
CDC40P40968 RSA4YCR072C 1548 nt5.44□□□□□ -1.54
CDC40P40968 GCN3YKR026C 918 nt5.44□□□□□ -1.54
CDC40P40968 YML6YML025C 861 nt5.44□□□□□ -1.54
CDC40P40968 RPL43AYPR043W 279 nt5.44□□□□□ -1.54
CDC40P40968 DPB2YPR175W 2070 nt5.44□□□□□ -1.54
CDC40P40968 HIS1YER055C 894 nt5.43□□□□□ -1.54
CDC40P40968 REV7YIL139C 738 nt5.43□□□□□ -1.54
CDC40P40968 YJU2YKL095W 837 nt5.43□□□□□ -1.54
CDC40P40968 YKR073CYKR073C 321 nt5.43□□□□□ -1.54
CDC40P40968 YPT10YBR264C 600 nt5.43□□□□□ -1.54
CDC40P40968 ECM7YLR443W 1347 nt5.43□□□□□ -1.54
CDC40P40968 KEL1YHR158C 3495 nt5.43□□□□□ -1.54
CDC40P40968 YFL013W-AYFL013W-A 804 nt5.42□□□□□ -1.54
CDC40P40968 YIL077CYIL077C 963 nt5.42□□□□□ -1.54
CDC40P40968 DOM34YNL001W 1161 nt5.42□□□□□ -1.54
CDC40P40968 RMD9YGL107C 1941 nt5.42□□□□□ -1.54
CDC40P40968 SPR1YOR190W 1338 nt5.42□□□□□ -1.54
CDC40P40968 VHT1YGR065C 1782 nt5.42□□□□□ -1.54
CDC40P40968 PSP2YML017W 1782 nt5.42□□□□□ -1.54
Retrieved 100 of 7,029 protein–RNA pairs in 36.8 ms