Protein–RNA interactions for Protein: P38287

CSH1, Mannosyl phosphorylinositol ceramide synthase CSH1, yeastyeast

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CSH1P38287 HIS1YER055C 894 nt5.39□□□□□ -1.55
CSH1P38287 PRI1YIR008C 1230 nt5.39□□□□□ -1.55
CSH1P38287 PPM2YOL141W 2088 nt5.39□□□□□ -1.55
CSH1P38287 GYP8YFL027C 1494 nt5.39□□□□□ -1.55
CSH1P38287 ICP55YER078C 1536 nt5.38□□□□□ -1.55
CSH1P38287 YKR032WYKR032W 315 nt5.38□□□□□ -1.55
CSH1P38287 TMA46YOR091W 1038 nt5.38□□□□□ -1.55
CSH1P38287 FRE5YOR384W 2085 nt5.38□□□□□ -1.55
CSH1P38287 EHD3YDR036C 1503 nt5.38□□□□□ -1.55
CSH1P38287 HED1YDR014W-A 489 nt5.37□□□□□ -1.55
CSH1P38287 tG(GCC)BtG(GCC)B 71 nt5.37□□□□□ -1.55
CSH1P38287 SUF16tG(GCC)C 71 nt5.37□□□□□ -1.55
CSH1P38287 tG(GCC)D1tG(GCC)D1 71 nt5.37□□□□□ -1.55
CSH1P38287 tG(GCC)D2tG(GCC)D2 71 nt5.37□□□□□ -1.55
CSH1P38287 tG(GCC)EtG(GCC)E 71 nt5.37□□□□□ -1.55
CSH1P38287 SUF20tG(GCC)F1 71 nt5.37□□□□□ -1.55
CSH1P38287 tG(GCC)F2tG(GCC)F2 71 nt5.37□□□□□ -1.55
CSH1P38287 tG(GCC)G1tG(GCC)G1 71 nt5.37□□□□□ -1.55
CSH1P38287 tG(GCC)G2tG(GCC)G2 71 nt5.37□□□□□ -1.55
CSH1P38287 tG(GCC)J1tG(GCC)J1 71 nt5.37□□□□□ -1.55
CSH1P38287 SUF23tG(GCC)J2 71 nt5.37□□□□□ -1.55
CSH1P38287 tG(GCC)MtG(GCC)M 71 nt5.37□□□□□ -1.55
CSH1P38287 tG(GCC)O1tG(GCC)O1 71 nt5.37□□□□□ -1.55
CSH1P38287 SUF17tG(GCC)O2 71 nt5.37□□□□□ -1.55
CSH1P38287 tG(GCC)P1tG(GCC)P1 71 nt5.37□□□□□ -1.55
CSH1P38287 tG(GCC)P2tG(GCC)P2 71 nt5.37□□□□□ -1.55
CSH1P38287 YPT1YFL038C 621 nt5.37□□□□□ -1.55
CSH1P38287 PUP2YGR253C 783 nt5.37□□□□□ -1.55
CSH1P38287 GLN3YER040W 2193 nt5.36□□□□□ -1.55
CSH1P38287 QCR6YFR033C 444 nt5.36□□□□□ -1.55
CSH1P38287 HMS2YJR147W 1077 nt5.36□□□□□ -1.55
CSH1P38287 SEC62YPL094C 825 nt5.36□□□□□ -1.55
CSH1P38287 YBL070CYBL070C 321 nt5.35□□□□□ -1.55
CSH1P38287 MIP1YOR330C 3765 nt5.35□□□□□ -1.55
CSH1P38287 MSC3YLR219W 2187 nt5.35□□□□□ -1.55
CSH1P38287 PAB1YER165W 1734 nt5.34□□□□□ -1.55
CSH1P38287 HEM1YDR232W 1647 nt5.34□□□□□ -1.55
CSH1P38287 VMA2YBR127C 1554 nt5.34□□□□□ -1.55
CSH1P38287 PHO3YBR092C 1404 nt5.34□□□□□ -1.55
CSH1P38287 STT3YGL022W 2157 nt5.34□□□□□ -1.55
CSH1P38287 YPR076WYPR076W 375 nt5.34□□□□□ -1.55
CSH1P38287 AIM46YHR199C 933 nt5.33□□□□□ -1.56
CSH1P38287 TPK1YJL164C 1194 nt5.33□□□□□ -1.56
CSH1P38287 YKL018C-AYKL018C-A 300 nt5.33□□□□□ -1.56
CSH1P38287 SWD1YAR003W 1281 nt5.33□□□□□ -1.56
CSH1P38287 YOX1YML027W 1158 nt5.33□□□□□ -1.56
CSH1P38287 EDE1YBL047C 4146 nt5.33□□□□□ -1.56
CSH1P38287 NUP49YGL172W 1419 nt5.32□□□□□ -1.56
CSH1P38287 YJL163CYJL163C 1668 nt5.32□□□□□ -1.56
CSH1P38287 MIA40YKL195W 1212 nt5.32□□□□□ -1.56
CSH1P38287 SML1YML058W 315 nt5.32□□□□□ -1.56
CSH1P38287 AIM33YML087C 939 nt5.32□□□□□ -1.56
CSH1P38287 FIT2YOR382W 462 nt5.32□□□□□ -1.56
CSH1P38287 COQ1YBR003W 1422 nt5.31□□□□□ -1.56
CSH1P38287 MFG1YDL233W 1377 nt5.31□□□□□ -1.56
CSH1P38287 SES1YDR023W 1389 nt5.31□□□□□ -1.56
CSH1P38287 PMT3YOR321W 2262 nt5.31□□□□□ -1.56
CSH1P38287 FBA1YKL060C 1080 nt5.31□□□□□ -1.56
CSH1P38287 KSH1YNL024C-A 219 nt5.31□□□□□ -1.56
CSH1P38287 NOG2YNR053C 1461 nt5.31□□□□□ -1.56
CSH1P38287 DOT1YDR440W 1749 nt5.31□□□□□ -1.56
CSH1P38287 LAT1YNL071W 1449 nt5.31□□□□□ -1.56
CSH1P38287 MPA43YNL249C 1629 nt5.3□□□□□ -1.56
CSH1P38287 COX10YPL172C 1389 nt5.3□□□□□ -1.56
CSH1P38287 SUF5tG(CCC)O 72 nt5.3□□□□□ -1.56
CSH1P38287 AGX1YFL030W 1158 nt5.3□□□□□ -1.56
CSH1P38287 PRE5YMR314W 705 nt5.3□□□□□ -1.56
CSH1P38287 YOL046CYOL046C 675 nt5.3□□□□□ -1.56
CSH1P38287 RFC4YOL094C 972 nt5.3□□□□□ -1.56
CSH1P38287 YBR113WYBR113W 483 nt5.3□□□□□ -1.56
CSH1P38287 NMT1YLR195C 1368 nt5.29□□□□□ -1.56
CSH1P38287 THI2YBR240C 1353 nt5.29□□□□□ -1.56
CSH1P38287 MKK1YOR231W 1527 nt5.29□□□□□ -1.56
CSH1P38287 RPR1RPR1 369 nt5.29□□□□□ -1.56
CSH1P38287 COX5AYNL052W 462 nt5.29□□□□□ -1.56
CSH1P38287 YNL200CYNL200C 741 nt5.29□□□□□ -1.56
CSH1P38287 YOR268CYOR268C 399 nt5.29□□□□□ -1.56
CSH1P38287 YPL250W-AYPL250W-A 288 nt5.29□□□□□ -1.56
CSH1P38287 ATF1YOR377W 1578 nt5.29□□□□□ -1.56
CSH1P38287 JIP4YDR475C 2631 nt5.28□□□□□ -1.56
CSH1P38287 YNL092WYNL092W 1203 nt5.28□□□□□ -1.56
CSH1P38287 DFR1YOR236W 636 nt5.28□□□□□ -1.56
CSH1P38287 YPR204WYPR204W 3099 nt5.27□□□□□ -1.57
CSH1P38287 KNS1YLL019C 2214 nt5.27□□□□□ -1.57
CSH1P38287 PPH21YDL134C 1110 nt5.27□□□□□ -1.57
CSH1P38287 RPP1YHR062C 882 nt5.27□□□□□ -1.57
CSH1P38287 YJR146WYJR146W 354 nt5.27□□□□□ -1.57
CSH1P38287 YNL120CYNL120C 486 nt5.27□□□□□ -1.57
CSH1P38287 NSE5YML023C 1671 nt5.27□□□□□ -1.57
CSH1P38287 CCC2YDR270W 3015 nt5.26□□□□□ -1.57
CSH1P38287 AVT4YNL101W 2142 nt5.26□□□□□ -1.57
CSH1P38287 SQT1YIR012W 1296 nt5.26□□□□□ -1.57
CSH1P38287 ERP2YAL007C 648 nt5.26□□□□□ -1.57
CSH1P38287 OGG1YML060W 1131 nt5.26□□□□□ -1.57
CSH1P38287 ZIM17YNL310C 525 nt5.26□□□□□ -1.57
CSH1P38287 TKL2YBR117C 2046 nt5.26□□□□□ -1.57
CSH1P38287 YFR006WYFR006W 1608 nt5.26□□□□□ -1.57
CSH1P38287 MSY1YPL097W 1479 nt5.26□□□□□ -1.57
CSH1P38287 HXT15YDL245C 1704 nt5.26□□□□□ -1.57
CSH1P38287 HXT16YJR158W 1704 nt5.26□□□□□ -1.57
Retrieved 100 of 7,029 protein–RNA pairs in 10.6 ms