Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNCAP37840 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNCAP37840 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNCAP37840 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNCAP37840 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNCAP37840 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNCAP37840 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
SNCAP37840 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC19.97■□□□□ 0.79
SNCAP37840 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNCAP37840 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.97■□□□□ 0.79
SNCAP37840 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SNCAP37840 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNCAP37840 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SNCAP37840 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SNCAP37840 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNCAP37840 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
SNCAP37840 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNCAP37840 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.95■□□□□ 0.78
SNCAP37840 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
SNCAP37840 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC19.95■□□□□ 0.78
SNCAP37840 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC19.95■□□□□ 0.78
SNCAP37840 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNCAP37840 CIB2-204ENST00000557846 934 ntTSL 3 BASIC19.95■□□□□ 0.78
SNCAP37840 AP006261.1-201ENST00000584783 668 ntBASIC19.95■□□□□ 0.78
SNCAP37840 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SNCAP37840 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNCAP37840 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SNCAP37840 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SNCAP37840 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNCAP37840 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SNCAP37840 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
SNCAP37840 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNCAP37840 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNCAP37840 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNCAP37840 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.94■□□□□ 0.78
SNCAP37840 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNCAP37840 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SNCAP37840 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.93■□□□□ 0.78
SNCAP37840 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNCAP37840 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
SNCAP37840 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNCAP37840 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNCAP37840 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNCAP37840 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNCAP37840 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
SNCAP37840 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
SNCAP37840 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC19.91■□□□□ 0.78
SNCAP37840 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.91■□□□□ 0.78
SNCAP37840 AC133561.1-201ENST00000568600 2415 ntBASIC19.91■□□□□ 0.78
SNCAP37840 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.91■□□□□ 0.78
SNCAP37840 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.91■□□□□ 0.78
SNCAP37840 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNCAP37840 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SNCAP37840 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.91■□□□□ 0.78
SNCAP37840 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNCAP37840 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC19.9■□□□□ 0.78
SNCAP37840 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNCAP37840 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SNCAP37840 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SNCAP37840 CALM3-209ENST00000597743 577 ntTSL 4 BASIC19.9■□□□□ 0.78
SNCAP37840 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNCAP37840 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNCAP37840 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNCAP37840 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
SNCAP37840 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SNCAP37840 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC19.89■□□□□ 0.77
SNCAP37840 AC092803.2-201ENST00000564287 1899 ntBASIC19.89■□□□□ 0.77
SNCAP37840 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNCAP37840 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.88■□□□□ 0.77
SNCAP37840 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNCAP37840 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC19.88■□□□□ 0.77
SNCAP37840 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SNCAP37840 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SNCAP37840 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNCAP37840 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNCAP37840 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNCAP37840 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.87■□□□□ 0.77
SNCAP37840 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SNCAP37840 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.87■□□□□ 0.77
SNCAP37840 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNCAP37840 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNCAP37840 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNCAP37840 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SNCAP37840 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SNCAP37840 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNCAP37840 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC19.86■□□□□ 0.77
SNCAP37840 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.86■□□□□ 0.77
SNCAP37840 ERN1-208ENST00000606895 2068 ntBASIC19.86■□□□□ 0.77
SNCAP37840 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNCAP37840 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNCAP37840 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
SNCAP37840 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
SNCAP37840 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SNCAP37840 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNCAP37840 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SNCAP37840 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.85■□□□□ 0.77
SNCAP37840 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SNCAP37840 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNCAP37840 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNCAP37840 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms