Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Abcd4O89016 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Abcd4O89016 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Abcd4O89016 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Abcd4O89016 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Abcd4O89016 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.05■□□□□ 0.8
Abcd4O89016 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Abcd4O89016 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Abcd4O89016 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Abcd4O89016 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Abcd4O89016 Gm10420-201ENSMUST00000121713 882 ntBASIC20.04■□□□□ 0.8
Abcd4O89016 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.04■□□□□ 0.8
Abcd4O89016 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Abcd4O89016 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Abcd4O89016 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Abcd4O89016 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Abcd4O89016 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Abcd4O89016 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Abcd4O89016 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Abcd4O89016 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Abcd4O89016 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.02■□□□□ 0.8
Abcd4O89016 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Abcd4O89016 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Abcd4O89016 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Abcd4O89016 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Abcd4O89016 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Abcd4O89016 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Abcd4O89016 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.01■□□□□ 0.79
Abcd4O89016 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.01■□□□□ 0.79
Abcd4O89016 Gm44428-201ENSMUST00000204474 874 ntBASIC20.01■□□□□ 0.79
Abcd4O89016 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Abcd4O89016 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Abcd4O89016 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Abcd4O89016 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Abcd4O89016 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20■□□□□ 0.79
Abcd4O89016 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20■□□□□ 0.79
Abcd4O89016 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20■□□□□ 0.79
Abcd4O89016 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20■□□□□ 0.79
Abcd4O89016 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Abcd4O89016 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.99■□□□□ 0.79
Abcd4O89016 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Abcd4O89016 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Abcd4O89016 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Abcd4O89016 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Abcd4O89016 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.98■□□□□ 0.79
Abcd4O89016 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Abcd4O89016 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Abcd4O89016 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Abcd4O89016 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Abcd4O89016 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Abcd4O89016 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Abcd4O89016 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Abcd4O89016 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Abcd4O89016 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.97■□□□□ 0.79
Abcd4O89016 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.96■□□□□ 0.79
Abcd4O89016 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.96■□□□□ 0.79
Abcd4O89016 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.96■□□□□ 0.79
Abcd4O89016 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Abcd4O89016 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Abcd4O89016 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Abcd4O89016 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Abcd4O89016 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Abcd4O89016 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Abcd4O89016 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Abcd4O89016 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Abcd4O89016 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Abcd4O89016 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
Abcd4O89016 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Abcd4O89016 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Abcd4O89016 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Abcd4O89016 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Abcd4O89016 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Abcd4O89016 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.91■□□□□ 0.78
Abcd4O89016 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Abcd4O89016 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Abcd4O89016 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Abcd4O89016 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Abcd4O89016 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Abcd4O89016 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Abcd4O89016 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Abcd4O89016 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.89■□□□□ 0.77
Abcd4O89016 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Abcd4O89016 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Abcd4O89016 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Abcd4O89016 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Abcd4O89016 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Abcd4O89016 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Abcd4O89016 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Abcd4O89016 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Abcd4O89016 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Abcd4O89016 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Abcd4O89016 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Abcd4O89016 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Abcd4O89016 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Abcd4O89016 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.88■□□□□ 0.77
Abcd4O89016 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
Abcd4O89016 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Abcd4O89016 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Abcd4O89016 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Abcd4O89016 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms