Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ARFGEF1Q9Y6D6 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
ARFGEF1Q9Y6D6 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC21.58■■□□□ 1.04
ARFGEF1Q9Y6D6 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.04
ARFGEF1Q9Y6D6 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC21.58■■□□□ 1.04
ARFGEF1Q9Y6D6 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
ARFGEF1Q9Y6D6 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ARFGEF1Q9Y6D6 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
ARFGEF1Q9Y6D6 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC21.57■■□□□ 1.04
ARFGEF1Q9Y6D6 TIMM8BP1-201ENST00000452384 211 ntBASIC21.57■■□□□ 1.04
ARFGEF1Q9Y6D6 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
ARFGEF1Q9Y6D6 TERF1P3-201ENST00000505638 1227 ntBASIC21.57■■□□□ 1.04
ARFGEF1Q9Y6D6 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC21.57■■□□□ 1.04
ARFGEF1Q9Y6D6 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ARFGEF1Q9Y6D6 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ARFGEF1Q9Y6D6 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC21.57■■□□□ 1.04
ARFGEF1Q9Y6D6 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC21.57■■□□□ 1.04
ARFGEF1Q9Y6D6 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ARFGEF1Q9Y6D6 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ARFGEF1Q9Y6D6 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ARFGEF1Q9Y6D6 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
ARFGEF1Q9Y6D6 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC21.57■■□□□ 1.04
ARFGEF1Q9Y6D6 NABP1-203ENST00000409510 843 ntTSL 5 BASIC21.57■■□□□ 1.04
ARFGEF1Q9Y6D6 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC21.57■■□□□ 1.04
ARFGEF1Q9Y6D6 AC069335.1-201ENST00000489972 472 ntBASIC21.57■■□□□ 1.04
ARFGEF1Q9Y6D6 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC21.57■■□□□ 1.04
ARFGEF1Q9Y6D6 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC21.57■■□□□ 1.04
ARFGEF1Q9Y6D6 AC019129.2-201ENST00000609837 1235 ntBASIC21.57■■□□□ 1.04
ARFGEF1Q9Y6D6 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ARFGEF1Q9Y6D6 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC21.57■■□□□ 1.04
ARFGEF1Q9Y6D6 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC21.57■■□□□ 1.04
ARFGEF1Q9Y6D6 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.57■■□□□ 1.04
ARFGEF1Q9Y6D6 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ARFGEF1Q9Y6D6 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC21.56■■□□□ 1.04
ARFGEF1Q9Y6D6 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ARFGEF1Q9Y6D6 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ARFGEF1Q9Y6D6 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC21.56■■□□□ 1.04
ARFGEF1Q9Y6D6 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
ARFGEF1Q9Y6D6 AC055876.3-201ENST00000431496 288 ntBASIC21.56■■□□□ 1.04
ARFGEF1Q9Y6D6 CNN2P2-201ENST00000443536 909 ntBASIC21.56■■□□□ 1.04
ARFGEF1Q9Y6D6 CNN2P3-201ENST00000450201 906 ntBASIC21.56■■□□□ 1.04
ARFGEF1Q9Y6D6 CXCL1P1-201ENST00000502804 216 ntBASIC21.56■■□□□ 1.04
ARFGEF1Q9Y6D6 COX11-202ENST00000571584 1108 ntTSL 2 BASIC21.56■■□□□ 1.04
ARFGEF1Q9Y6D6 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ARFGEF1Q9Y6D6 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC21.56■■□□□ 1.04
ARFGEF1Q9Y6D6 AC138649.4-201ENST00000612222 287 ntBASIC21.56■■□□□ 1.04
ARFGEF1Q9Y6D6 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ARFGEF1Q9Y6D6 AL136317.3-201ENST00000618497 906 ntBASIC21.56■■□□□ 1.04
ARFGEF1Q9Y6D6 SERF2-217ENST00000630046 862 ntTSL 5 BASIC21.56■■□□□ 1.04
ARFGEF1Q9Y6D6 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ARFGEF1Q9Y6D6 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC21.56■■□□□ 1.04
ARFGEF1Q9Y6D6 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ARFGEF1Q9Y6D6 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
ARFGEF1Q9Y6D6 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
ARFGEF1Q9Y6D6 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ARFGEF1Q9Y6D6 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
ARFGEF1Q9Y6D6 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
ARFGEF1Q9Y6D6 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.56■■□□□ 1.04
ARFGEF1Q9Y6D6 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ARFGEF1Q9Y6D6 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
ARFGEF1Q9Y6D6 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
ARFGEF1Q9Y6D6 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
ARFGEF1Q9Y6D6 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC21.55■■□□□ 1.04
ARFGEF1Q9Y6D6 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC21.55■■□□□ 1.04
ARFGEF1Q9Y6D6 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
ARFGEF1Q9Y6D6 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
ARFGEF1Q9Y6D6 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ARFGEF1Q9Y6D6 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ARFGEF1Q9Y6D6 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ARFGEF1Q9Y6D6 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ARFGEF1Q9Y6D6 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ARFGEF1Q9Y6D6 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ARFGEF1Q9Y6D6 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ARFGEF1Q9Y6D6 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC21.55■■□□□ 1.04
ARFGEF1Q9Y6D6 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ARFGEF1Q9Y6D6 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ARFGEF1Q9Y6D6 VMA21-202ENST00000370361 693 ntTSL 5 BASIC21.55■■□□□ 1.04
ARFGEF1Q9Y6D6 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
ARFGEF1Q9Y6D6 GRAP-202ENST00000395635 834 ntTSL 2 BASIC21.55■■□□□ 1.04
ARFGEF1Q9Y6D6 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC21.55■■□□□ 1.04
ARFGEF1Q9Y6D6 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC21.55■■□□□ 1.04
ARFGEF1Q9Y6D6 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC21.55■■□□□ 1.04
ARFGEF1Q9Y6D6 KRT8P48-201ENST00000515599 1220 ntBASIC21.55■■□□□ 1.04
ARFGEF1Q9Y6D6 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC21.55■■□□□ 1.04
ARFGEF1Q9Y6D6 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC21.55■■□□□ 1.04
ARFGEF1Q9Y6D6 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC21.55■■□□□ 1.04
ARFGEF1Q9Y6D6 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC21.55■■□□□ 1.04
ARFGEF1Q9Y6D6 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC21.55■■□□□ 1.04
ARFGEF1Q9Y6D6 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ARFGEF1Q9Y6D6 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ARFGEF1Q9Y6D6 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ARFGEF1Q9Y6D6 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC21.55■■□□□ 1.04
ARFGEF1Q9Y6D6 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
ARFGEF1Q9Y6D6 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ARFGEF1Q9Y6D6 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC21.54■■□□□ 1.04
ARFGEF1Q9Y6D6 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ARFGEF1Q9Y6D6 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC21.54■■□□□ 1.04
ARFGEF1Q9Y6D6 AC093010.1-201ENST00000473625 1624 ntBASIC21.54■■□□□ 1.04
ARFGEF1Q9Y6D6 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.54■■□□□ 1.04
ARFGEF1Q9Y6D6 AL049757.1-201ENST00000616842 1596 ntBASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms