Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN16Q9Y5I7 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.55■□□□□ 0.24
CLDN16Q9Y5I7 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CLDN16Q9Y5I7 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CLDN16Q9Y5I7 LINC00304-203ENST00000565008 1864 ntBASIC16.54■□□□□ 0.24
CLDN16Q9Y5I7 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN16Q9Y5I7 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN16Q9Y5I7 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.54■□□□□ 0.24
CLDN16Q9Y5I7 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.54■□□□□ 0.24
CLDN16Q9Y5I7 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CLDN16Q9Y5I7 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN16Q9Y5I7 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN16Q9Y5I7 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN16Q9Y5I7 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.54■□□□□ 0.24
CLDN16Q9Y5I7 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.54■□□□□ 0.24
CLDN16Q9Y5I7 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN16Q9Y5I7 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.54■□□□□ 0.24
CLDN16Q9Y5I7 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.54■□□□□ 0.24
CLDN16Q9Y5I7 EMBP1-201ENST00000458200 901 ntBASIC16.54■□□□□ 0.24
CLDN16Q9Y5I7 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.54■□□□□ 0.24
CLDN16Q9Y5I7 AC111152.3-201ENST00000569699 673 ntBASIC16.54■□□□□ 0.24
CLDN16Q9Y5I7 RN7SL510P-201ENST00000581311 263 ntBASIC16.54■□□□□ 0.24
CLDN16Q9Y5I7 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
CLDN16Q9Y5I7 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN16Q9Y5I7 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN16Q9Y5I7 AC134043.2-201ENST00000624206 2238 ntBASIC16.54■□□□□ 0.24
CLDN16Q9Y5I7 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
CLDN16Q9Y5I7 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN16Q9Y5I7 AL353593.2-201ENST00000602529 1483 ntBASIC16.54■□□□□ 0.24
CLDN16Q9Y5I7 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.54■□□□□ 0.24
CLDN16Q9Y5I7 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN16Q9Y5I7 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.54■□□□□ 0.24
CLDN16Q9Y5I7 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
CLDN16Q9Y5I7 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN16Q9Y5I7 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CLDN16Q9Y5I7 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.53■□□□□ 0.24
CLDN16Q9Y5I7 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CLDN16Q9Y5I7 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CLDN16Q9Y5I7 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.53■□□□□ 0.24
CLDN16Q9Y5I7 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.53■□□□□ 0.24
CLDN16Q9Y5I7 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN16Q9Y5I7 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.53■□□□□ 0.24
CLDN16Q9Y5I7 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN16Q9Y5I7 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN16Q9Y5I7 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN16Q9Y5I7 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.53■□□□□ 0.24
CLDN16Q9Y5I7 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN16Q9Y5I7 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
CLDN16Q9Y5I7 AC106795.1-205ENST00000512851 1056 ntBASIC16.53■□□□□ 0.24
CLDN16Q9Y5I7 AF238378.1-201ENST00000526806 358 ntBASIC16.53■□□□□ 0.24
CLDN16Q9Y5I7 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.53■□□□□ 0.24
CLDN16Q9Y5I7 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN16Q9Y5I7 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN16Q9Y5I7 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.53■□□□□ 0.24
CLDN16Q9Y5I7 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN16Q9Y5I7 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
CLDN16Q9Y5I7 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.53■□□□□ 0.24
CLDN16Q9Y5I7 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN16Q9Y5I7 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN16Q9Y5I7 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.53■□□□□ 0.24
CLDN16Q9Y5I7 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.53■□□□□ 0.24
CLDN16Q9Y5I7 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN16Q9Y5I7 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN16Q9Y5I7 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.52■□□□□ 0.24
CLDN16Q9Y5I7 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN16Q9Y5I7 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN16Q9Y5I7 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN16Q9Y5I7 PMPCAP1-201ENST00000508114 1576 ntBASIC16.52■□□□□ 0.24
CLDN16Q9Y5I7 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN16Q9Y5I7 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CLDN16Q9Y5I7 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN16Q9Y5I7 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
CLDN16Q9Y5I7 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN16Q9Y5I7 ABCD1P5-201ENST00000445663 754 ntBASIC16.52■□□□□ 0.24
CLDN16Q9Y5I7 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN16Q9Y5I7 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.52■□□□□ 0.24
CLDN16Q9Y5I7 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.52■□□□□ 0.24
CLDN16Q9Y5I7 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.52■□□□□ 0.24
CLDN16Q9Y5I7 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.52■□□□□ 0.24
CLDN16Q9Y5I7 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.52■□□□□ 0.24
CLDN16Q9Y5I7 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN16Q9Y5I7 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN16Q9Y5I7 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.52■□□□□ 0.23
CLDN16Q9Y5I7 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
CLDN16Q9Y5I7 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.52■□□□□ 0.23
CLDN16Q9Y5I7 KRT8P10-201ENST00000450021 1447 ntBASIC16.52■□□□□ 0.23
CLDN16Q9Y5I7 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
CLDN16Q9Y5I7 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.23
CLDN16Q9Y5I7 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.51■□□□□ 0.23
CLDN16Q9Y5I7 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN16Q9Y5I7 AL355312.1-201ENST00000407115 2176 ntBASIC16.51■□□□□ 0.23
CLDN16Q9Y5I7 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN16Q9Y5I7 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CLDN16Q9Y5I7 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.51■□□□□ 0.23
CLDN16Q9Y5I7 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN16Q9Y5I7 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN16Q9Y5I7 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN16Q9Y5I7 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CLDN16Q9Y5I7 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.51■□□□□ 0.23
CLDN16Q9Y5I7 AC103564.2-201ENST00000432853 1299 ntBASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms