Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHAC2Q9Y5I4 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHAC2Q9Y5I4 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHAC2Q9Y5I4 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHAC2Q9Y5I4 CD82-202ENST00000342935 967 ntTSL 5 BASIC21.06■□□□□ 0.96
PCDHAC2Q9Y5I4 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC21.06■□□□□ 0.96
PCDHAC2Q9Y5I4 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC21.06■□□□□ 0.96
PCDHAC2Q9Y5I4 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
PCDHAC2Q9Y5I4 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC21.06■□□□□ 0.96
PCDHAC2Q9Y5I4 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC21.06■□□□□ 0.96
PCDHAC2Q9Y5I4 AC008667.4-201ENST00000607370 168 ntBASIC21.06■□□□□ 0.96
PCDHAC2Q9Y5I4 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC21.06■□□□□ 0.96
PCDHAC2Q9Y5I4 GPR89P-201ENST00000407924 1495 ntBASIC21.06■□□□□ 0.96
PCDHAC2Q9Y5I4 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC21.06■□□□□ 0.96
PCDHAC2Q9Y5I4 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
PCDHAC2Q9Y5I4 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
PCDHAC2Q9Y5I4 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDHAC2Q9Y5I4 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHAC2Q9Y5I4 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC21.05■□□□□ 0.96
PCDHAC2Q9Y5I4 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHAC2Q9Y5I4 NCF1C-201ENST00000438382 1427 ntBASIC21.05■□□□□ 0.96
PCDHAC2Q9Y5I4 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
PCDHAC2Q9Y5I4 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDHAC2Q9Y5I4 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHAC2Q9Y5I4 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHAC2Q9Y5I4 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
PCDHAC2Q9Y5I4 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHAC2Q9Y5I4 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHAC2Q9Y5I4 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHAC2Q9Y5I4 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHAC2Q9Y5I4 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHAC2Q9Y5I4 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHAC2Q9Y5I4 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
PCDHAC2Q9Y5I4 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHAC2Q9Y5I4 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC21.05■□□□□ 0.96
PCDHAC2Q9Y5I4 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC21.05■□□□□ 0.96
PCDHAC2Q9Y5I4 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC21.05■□□□□ 0.96
PCDHAC2Q9Y5I4 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
PCDHAC2Q9Y5I4 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC21.05■□□□□ 0.96
PCDHAC2Q9Y5I4 RPS15-207ENST00000591032 550 ntTSL 3 BASIC21.05■□□□□ 0.96
PCDHAC2Q9Y5I4 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHAC2Q9Y5I4 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDHAC2Q9Y5I4 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDHAC2Q9Y5I4 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHAC2Q9Y5I4 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHAC2Q9Y5I4 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHAC2Q9Y5I4 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHAC2Q9Y5I4 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC21.04■□□□□ 0.96
PCDHAC2Q9Y5I4 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHAC2Q9Y5I4 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHAC2Q9Y5I4 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC21.04■□□□□ 0.96
PCDHAC2Q9Y5I4 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC21.04■□□□□ 0.96
PCDHAC2Q9Y5I4 CIPC-205ENST00000555437 566 ntTSL 3 BASIC21.04■□□□□ 0.96
PCDHAC2Q9Y5I4 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC21.04■□□□□ 0.96
PCDHAC2Q9Y5I4 OR7E47P-204ENST00000575924 449 ntBASIC21.04■□□□□ 0.96
PCDHAC2Q9Y5I4 GID4-202ENST00000376345 1391 ntTSL 3 BASIC21.04■□□□□ 0.96
PCDHAC2Q9Y5I4 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHAC2Q9Y5I4 AC002310.6-201ENST00000624451 1377 ntBASIC21.04■□□□□ 0.96
PCDHAC2Q9Y5I4 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC21.04■□□□□ 0.96
PCDHAC2Q9Y5I4 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHAC2Q9Y5I4 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC21.04■□□□□ 0.96
PCDHAC2Q9Y5I4 AC120498.9-201ENST00000339021 3867 ntBASIC21.04■□□□□ 0.96
PCDHAC2Q9Y5I4 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
PCDHAC2Q9Y5I4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.04■□□□□ 0.96
PCDHAC2Q9Y5I4 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHAC2Q9Y5I4 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHAC2Q9Y5I4 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC21.04■□□□□ 0.96
PCDHAC2Q9Y5I4 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHAC2Q9Y5I4 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHAC2Q9Y5I4 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHAC2Q9Y5I4 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHAC2Q9Y5I4 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHAC2Q9Y5I4 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHAC2Q9Y5I4 HARS-201ENST00000307633 1780 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDHAC2Q9Y5I4 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHAC2Q9Y5I4 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHAC2Q9Y5I4 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHAC2Q9Y5I4 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHAC2Q9Y5I4 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHAC2Q9Y5I4 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDHAC2Q9Y5I4 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC21.03■□□□□ 0.96
PCDHAC2Q9Y5I4 POLD4-207ENST00000531239 584 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDHAC2Q9Y5I4 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC21.03■□□□□ 0.96
PCDHAC2Q9Y5I4 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHAC2Q9Y5I4 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC21.03■□□□□ 0.96
PCDHAC2Q9Y5I4 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC21.03■□□□□ 0.96
PCDHAC2Q9Y5I4 AC018445.3-201ENST00000624177 1945 ntBASIC21.03■□□□□ 0.96
PCDHAC2Q9Y5I4 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHAC2Q9Y5I4 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHAC2Q9Y5I4 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHAC2Q9Y5I4 POR-209ENST00000439269 1858 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDHAC2Q9Y5I4 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHAC2Q9Y5I4 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
PCDHAC2Q9Y5I4 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC21.02■□□□□ 0.96
PCDHAC2Q9Y5I4 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHAC2Q9Y5I4 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHAC2Q9Y5I4 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC21.02■□□□□ 0.96
PCDHAC2Q9Y5I4 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHAC2Q9Y5I4 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHAC2Q9Y5I4 PTCHD3P3-201ENST00000403073 906 ntBASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms