Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SPG7Q9UQ90 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC23.16■■□□□ 1.3
SPG7Q9UQ90 MCCD1P2-201ENST00000423228 335 ntBASIC23.16■■□□□ 1.3
SPG7Q9UQ90 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC23.16■■□□□ 1.3
SPG7Q9UQ90 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC23.16■■□□□ 1.3
SPG7Q9UQ90 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
SPG7Q9UQ90 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC23.16■■□□□ 1.3
SPG7Q9UQ90 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC23.16■■□□□ 1.3
SPG7Q9UQ90 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SPG7Q9UQ90 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SPG7Q9UQ90 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SPG7Q9UQ90 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SPG7Q9UQ90 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SPG7Q9UQ90 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
SPG7Q9UQ90 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC23.15■■□□□ 1.3
SPG7Q9UQ90 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
SPG7Q9UQ90 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SPG7Q9UQ90 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
SPG7Q9UQ90 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SPG7Q9UQ90 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SPG7Q9UQ90 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SPG7Q9UQ90 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC23.15■■□□□ 1.3
SPG7Q9UQ90 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC23.15■■□□□ 1.3
SPG7Q9UQ90 S100A2-206ENST00000497140 697 ntTSL 2 BASIC23.15■■□□□ 1.3
SPG7Q9UQ90 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SPG7Q9UQ90 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SPG7Q9UQ90 TMED1-207ENST00000591695 809 ntTSL 5 BASIC23.15■■□□□ 1.3
SPG7Q9UQ90 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SPG7Q9UQ90 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SPG7Q9UQ90 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SPG7Q9UQ90 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SPG7Q9UQ90 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SPG7Q9UQ90 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SPG7Q9UQ90 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
SPG7Q9UQ90 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
SPG7Q9UQ90 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SPG7Q9UQ90 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.3
SPG7Q9UQ90 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC23.14■■□□□ 1.3
SPG7Q9UQ90 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SPG7Q9UQ90 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SPG7Q9UQ90 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC23.14■■□□□ 1.29
SPG7Q9UQ90 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
SPG7Q9UQ90 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
SPG7Q9UQ90 AC108073.2-201ENST00000464002 357 ntBASIC23.14■■□□□ 1.29
SPG7Q9UQ90 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC23.14■■□□□ 1.29
SPG7Q9UQ90 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC23.14■■□□□ 1.29
SPG7Q9UQ90 AC008667.4-201ENST00000607370 168 ntBASIC23.14■■□□□ 1.29
SPG7Q9UQ90 AC116407.2-201ENST00000613639 860 ntBASIC23.14■■□□□ 1.29
SPG7Q9UQ90 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.29
SPG7Q9UQ90 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC23.14■■□□□ 1.29
SPG7Q9UQ90 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
SPG7Q9UQ90 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SPG7Q9UQ90 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SPG7Q9UQ90 GID4-202ENST00000376345 1391 ntTSL 3 BASIC23.14■■□□□ 1.29
SPG7Q9UQ90 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SPG7Q9UQ90 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC23.14■■□□□ 1.29
SPG7Q9UQ90 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SPG7Q9UQ90 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SPG7Q9UQ90 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC23.13■■□□□ 1.29
SPG7Q9UQ90 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SPG7Q9UQ90 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SPG7Q9UQ90 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC23.13■■□□□ 1.29
SPG7Q9UQ90 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC23.13■■□□□ 1.29
SPG7Q9UQ90 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
SPG7Q9UQ90 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC23.13■■□□□ 1.29
SPG7Q9UQ90 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
SPG7Q9UQ90 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SPG7Q9UQ90 AC211486.1-202ENST00000416371 468 ntBASIC23.13■■□□□ 1.29
SPG7Q9UQ90 DNAJB3-202ENST00000449667 1266 ntBASIC23.13■■□□□ 1.29
SPG7Q9UQ90 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC23.13■■□□□ 1.29
SPG7Q9UQ90 RPS15P9-201ENST00000494093 319 ntBASIC23.13■■□□□ 1.29
SPG7Q9UQ90 AC211476.1-201ENST00000503899 468 ntBASIC23.13■■□□□ 1.29
SPG7Q9UQ90 IGHV3-65-201ENST00000523210 341 ntBASIC23.13■■□□□ 1.29
SPG7Q9UQ90 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC23.13■■□□□ 1.29
SPG7Q9UQ90 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC23.13■■□□□ 1.29
SPG7Q9UQ90 AC109462.3-201ENST00000573934 613 ntBASIC23.13■■□□□ 1.29
SPG7Q9UQ90 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SPG7Q9UQ90 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SPG7Q9UQ90 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
SPG7Q9UQ90 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC23.13■■□□□ 1.29
SPG7Q9UQ90 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC23.13■■□□□ 1.29
SPG7Q9UQ90 AC002310.6-201ENST00000624451 1377 ntBASIC23.13■■□□□ 1.29
SPG7Q9UQ90 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC23.13■■□□□ 1.29
SPG7Q9UQ90 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC23.13■■□□□ 1.29
SPG7Q9UQ90 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
SPG7Q9UQ90 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC23.12■■□□□ 1.29
SPG7Q9UQ90 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC23.12■■□□□ 1.29
SPG7Q9UQ90 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC23.12■■□□□ 1.29
SPG7Q9UQ90 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
SPG7Q9UQ90 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
SPG7Q9UQ90 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC23.12■■□□□ 1.29
SPG7Q9UQ90 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC23.12■■□□□ 1.29
SPG7Q9UQ90 AC120498.9-201ENST00000339021 3867 ntBASIC23.12■■□□□ 1.29
SPG7Q9UQ90 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SPG7Q9UQ90 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SPG7Q9UQ90 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SPG7Q9UQ90 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
SPG7Q9UQ90 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC23.12■■□□□ 1.29
SPG7Q9UQ90 VN2R19P-201ENST00000442399 1052 ntBASIC23.12■■□□□ 1.29
SPG7Q9UQ90 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms