Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
GTF3C4Q9UKN8 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
GTF3C4Q9UKN8 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GTF3C4Q9UKN8 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GTF3C4Q9UKN8 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GTF3C4Q9UKN8 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
GTF3C4Q9UKN8 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
GTF3C4Q9UKN8 FOSL1P1-201ENST00000511041 816 ntBASIC19.18■□□□□ 0.66
GTF3C4Q9UKN8 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.18■□□□□ 0.66
GTF3C4Q9UKN8 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.18■□□□□ 0.66
GTF3C4Q9UKN8 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.18■□□□□ 0.66
GTF3C4Q9UKN8 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.18■□□□□ 0.66
GTF3C4Q9UKN8 AL353801.3-201ENST00000609898 542 ntBASIC19.18■□□□□ 0.66
GTF3C4Q9UKN8 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
GTF3C4Q9UKN8 AC009154.2-201ENST00000621177 724 ntBASIC19.18■□□□□ 0.66
GTF3C4Q9UKN8 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.18■□□□□ 0.66
GTF3C4Q9UKN8 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GTF3C4Q9UKN8 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GTF3C4Q9UKN8 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
GTF3C4Q9UKN8 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
GTF3C4Q9UKN8 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GTF3C4Q9UKN8 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
GTF3C4Q9UKN8 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GTF3C4Q9UKN8 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.17■□□□□ 0.66
GTF3C4Q9UKN8 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
GTF3C4Q9UKN8 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GTF3C4Q9UKN8 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GTF3C4Q9UKN8 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
GTF3C4Q9UKN8 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GTF3C4Q9UKN8 AC012317.2-201ENST00000623305 2251 ntBASIC19.17■□□□□ 0.66
GTF3C4Q9UKN8 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
GTF3C4Q9UKN8 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GTF3C4Q9UKN8 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GTF3C4Q9UKN8 VENTXP7-201ENST00000475503 772 ntBASIC19.17■□□□□ 0.66
GTF3C4Q9UKN8 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
GTF3C4Q9UKN8 AC099336.1-202ENST00000602961 463 ntBASIC19.17■□□□□ 0.66
GTF3C4Q9UKN8 AL121894.2-201ENST00000602977 491 ntBASIC19.17■□□□□ 0.66
GTF3C4Q9UKN8 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GTF3C4Q9UKN8 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GTF3C4Q9UKN8 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GTF3C4Q9UKN8 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GTF3C4Q9UKN8 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GTF3C4Q9UKN8 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GTF3C4Q9UKN8 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
GTF3C4Q9UKN8 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.16■□□□□ 0.66
GTF3C4Q9UKN8 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GTF3C4Q9UKN8 NSUN5P1-202ENST00000421140 1535 ntBASIC19.16■□□□□ 0.66
GTF3C4Q9UKN8 NSUN5P2-203ENST00000457352 1529 ntBASIC19.16■□□□□ 0.66
GTF3C4Q9UKN8 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GTF3C4Q9UKN8 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
GTF3C4Q9UKN8 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GTF3C4Q9UKN8 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
GTF3C4Q9UKN8 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.16■□□□□ 0.66
GTF3C4Q9UKN8 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.16■□□□□ 0.66
GTF3C4Q9UKN8 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.16■□□□□ 0.66
GTF3C4Q9UKN8 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
GTF3C4Q9UKN8 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.16■□□□□ 0.66
GTF3C4Q9UKN8 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GTF3C4Q9UKN8 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
GTF3C4Q9UKN8 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
GTF3C4Q9UKN8 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.16■□□□□ 0.66
GTF3C4Q9UKN8 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
GTF3C4Q9UKN8 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.16■□□□□ 0.66
GTF3C4Q9UKN8 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.16■□□□□ 0.66
GTF3C4Q9UKN8 AC246785.2-201ENST00000432512 513 ntBASIC19.16■□□□□ 0.66
GTF3C4Q9UKN8 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.16■□□□□ 0.66
GTF3C4Q9UKN8 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.16■□□□□ 0.66
GTF3C4Q9UKN8 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.16■□□□□ 0.66
GTF3C4Q9UKN8 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.16■□□□□ 0.66
GTF3C4Q9UKN8 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GTF3C4Q9UKN8 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.16■□□□□ 0.66
GTF3C4Q9UKN8 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.16■□□□□ 0.66
GTF3C4Q9UKN8 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
GTF3C4Q9UKN8 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.16■□□□□ 0.66
GTF3C4Q9UKN8 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GTF3C4Q9UKN8 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.16■□□□□ 0.66
GTF3C4Q9UKN8 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GTF3C4Q9UKN8 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
GTF3C4Q9UKN8 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.16■□□□□ 0.66
GTF3C4Q9UKN8 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
GTF3C4Q9UKN8 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GTF3C4Q9UKN8 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GTF3C4Q9UKN8 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.16■□□□□ 0.66
GTF3C4Q9UKN8 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GTF3C4Q9UKN8 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
GTF3C4Q9UKN8 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.15■□□□□ 0.66
GTF3C4Q9UKN8 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GTF3C4Q9UKN8 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GTF3C4Q9UKN8 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
GTF3C4Q9UKN8 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
GTF3C4Q9UKN8 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.15■□□□□ 0.66
GTF3C4Q9UKN8 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.15■□□□□ 0.66
GTF3C4Q9UKN8 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GTF3C4Q9UKN8 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GTF3C4Q9UKN8 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.15■□□□□ 0.66
GTF3C4Q9UKN8 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.15■□□□□ 0.66
GTF3C4Q9UKN8 TSPY19P-201ENST00000418461 509 ntBASIC19.15■□□□□ 0.66
GTF3C4Q9UKN8 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.15■□□□□ 0.66
GTF3C4Q9UKN8 TSPY18P-201ENST00000441642 509 ntBASIC19.15■□□□□ 0.66
GTF3C4Q9UKN8 MTCL1P1-201ENST00000446207 792 ntBASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms