Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.44■□□□□ 0.86
USP25Q9UHP3 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP25Q9UHP3 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.43■□□□□ 0.86
USP25Q9UHP3 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP25Q9UHP3 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP25Q9UHP3 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
USP25Q9UHP3 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP25Q9UHP3 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP25Q9UHP3 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP25Q9UHP3 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP25Q9UHP3 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
USP25Q9UHP3 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP25Q9UHP3 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP25Q9UHP3 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
USP25Q9UHP3 AP000523.1-201ENST00000398242 1049 ntBASIC20.43■□□□□ 0.86
USP25Q9UHP3 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.43■□□□□ 0.86
USP25Q9UHP3 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP25Q9UHP3 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC20.43■□□□□ 0.86
USP25Q9UHP3 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP25Q9UHP3 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP25Q9UHP3 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
USP25Q9UHP3 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP25Q9UHP3 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP25Q9UHP3 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.43■□□□□ 0.86
USP25Q9UHP3 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.43■□□□□ 0.86
USP25Q9UHP3 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.43■□□□□ 0.86
USP25Q9UHP3 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP25Q9UHP3 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP25Q9UHP3 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP25Q9UHP3 AL355312.1-201ENST00000407115 2176 ntBASIC20.42■□□□□ 0.86
USP25Q9UHP3 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP25Q9UHP3 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP25Q9UHP3 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP25Q9UHP3 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.42■□□□□ 0.86
USP25Q9UHP3 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
USP25Q9UHP3 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC20.42■□□□□ 0.86
USP25Q9UHP3 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
USP25Q9UHP3 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP25Q9UHP3 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP25Q9UHP3 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP25Q9UHP3 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP25Q9UHP3 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.42■□□□□ 0.86
USP25Q9UHP3 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.42■□□□□ 0.86
USP25Q9UHP3 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.42■□□□□ 0.86
USP25Q9UHP3 MIR3917-201ENST00000580971 93 ntBASIC20.42■□□□□ 0.86
USP25Q9UHP3 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
USP25Q9UHP3 AC024243.1-201ENST00000609234 778 ntBASIC20.42■□□□□ 0.86
USP25Q9UHP3 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.42■□□□□ 0.86
USP25Q9UHP3 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
USP25Q9UHP3 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP25Q9UHP3 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
USP25Q9UHP3 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP25Q9UHP3 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP25Q9UHP3 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP25Q9UHP3 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.42■□□□□ 0.86
USP25Q9UHP3 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP25Q9UHP3 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.42■□□□□ 0.86
USP25Q9UHP3 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP25Q9UHP3 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP25Q9UHP3 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC20.41■□□□□ 0.86
USP25Q9UHP3 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP25Q9UHP3 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
USP25Q9UHP3 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP25Q9UHP3 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
USP25Q9UHP3 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP25Q9UHP3 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC20.41■□□□□ 0.86
USP25Q9UHP3 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.41■□□□□ 0.86
USP25Q9UHP3 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP25Q9UHP3 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP25Q9UHP3 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP25Q9UHP3 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP25Q9UHP3 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.41■□□□□ 0.86
USP25Q9UHP3 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.41■□□□□ 0.86
USP25Q9UHP3 ECEL1P2-202ENST00000465689 757 ntBASIC20.41■□□□□ 0.86
USP25Q9UHP3 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.41■□□□□ 0.86
USP25Q9UHP3 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP25Q9UHP3 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.41■□□□□ 0.86
USP25Q9UHP3 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP25Q9UHP3 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP25Q9UHP3 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP25Q9UHP3 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.41■□□□□ 0.86
USP25Q9UHP3 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
USP25Q9UHP3 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
USP25Q9UHP3 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.41■□□□□ 0.86
USP25Q9UHP3 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP25Q9UHP3 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP25Q9UHP3 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
USP25Q9UHP3 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP25Q9UHP3 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC20.41■□□□□ 0.86
USP25Q9UHP3 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP25Q9UHP3 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP25Q9UHP3 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
USP25Q9UHP3 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP25Q9UHP3 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP25Q9UHP3 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP25Q9UHP3 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
USP25Q9UHP3 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
USP25Q9UHP3 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
USP25Q9UHP3 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.4■□□□□ 0.86
USP25Q9UHP3 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms