Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
DNMT3BQ9UBC3 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.52■□□□□ 0.55
DNMT3BQ9UBC3 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
DNMT3BQ9UBC3 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
DNMT3BQ9UBC3 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DNMT3BQ9UBC3 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DNMT3BQ9UBC3 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
DNMT3BQ9UBC3 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DNMT3BQ9UBC3 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.51■□□□□ 0.55
DNMT3BQ9UBC3 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.51■□□□□ 0.55
DNMT3BQ9UBC3 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
DNMT3BQ9UBC3 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DNMT3BQ9UBC3 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DNMT3BQ9UBC3 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.51■□□□□ 0.55
DNMT3BQ9UBC3 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DNMT3BQ9UBC3 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DNMT3BQ9UBC3 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.51■□□□□ 0.55
DNMT3BQ9UBC3 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
DNMT3BQ9UBC3 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.51■□□□□ 0.55
DNMT3BQ9UBC3 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.51■□□□□ 0.55
DNMT3BQ9UBC3 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.51■□□□□ 0.55
DNMT3BQ9UBC3 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.51■□□□□ 0.55
DNMT3BQ9UBC3 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.51■□□□□ 0.55
DNMT3BQ9UBC3 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.51■□□□□ 0.55
DNMT3BQ9UBC3 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
DNMT3BQ9UBC3 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
DNMT3BQ9UBC3 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
DNMT3BQ9UBC3 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DNMT3BQ9UBC3 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
DNMT3BQ9UBC3 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.5■□□□□ 0.55
DNMT3BQ9UBC3 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
DNMT3BQ9UBC3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DNMT3BQ9UBC3 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.5■□□□□ 0.55
DNMT3BQ9UBC3 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
DNMT3BQ9UBC3 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DNMT3BQ9UBC3 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
DNMT3BQ9UBC3 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.5■□□□□ 0.55
DNMT3BQ9UBC3 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.5■□□□□ 0.55
DNMT3BQ9UBC3 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
DNMT3BQ9UBC3 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DNMT3BQ9UBC3 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
DNMT3BQ9UBC3 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DNMT3BQ9UBC3 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.5■□□□□ 0.55
DNMT3BQ9UBC3 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
DNMT3BQ9UBC3 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
DNMT3BQ9UBC3 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DNMT3BQ9UBC3 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.5■□□□□ 0.55
DNMT3BQ9UBC3 AC023274.1-201ENST00000418278 595 ntBASIC18.5■□□□□ 0.55
DNMT3BQ9UBC3 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.5■□□□□ 0.55
DNMT3BQ9UBC3 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.5■□□□□ 0.55
DNMT3BQ9UBC3 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
DNMT3BQ9UBC3 PGM5P2-202ENST00000637225 1043 ntBASIC18.5■□□□□ 0.55
DNMT3BQ9UBC3 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DNMT3BQ9UBC3 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.5■□□□□ 0.55
DNMT3BQ9UBC3 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DNMT3BQ9UBC3 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.5■□□□□ 0.55
DNMT3BQ9UBC3 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
DNMT3BQ9UBC3 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DNMT3BQ9UBC3 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
DNMT3BQ9UBC3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.49■□□□□ 0.55
DNMT3BQ9UBC3 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DNMT3BQ9UBC3 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
DNMT3BQ9UBC3 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DNMT3BQ9UBC3 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.49■□□□□ 0.55
DNMT3BQ9UBC3 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.49■□□□□ 0.55
DNMT3BQ9UBC3 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.49■□□□□ 0.55
DNMT3BQ9UBC3 AC004832.2-201ENST00000426397 482 ntBASIC18.49■□□□□ 0.55
DNMT3BQ9UBC3 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DNMT3BQ9UBC3 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.49■□□□□ 0.55
DNMT3BQ9UBC3 DNAJB3-201ENST00000446806 729 ntBASIC18.49■□□□□ 0.55
DNMT3BQ9UBC3 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
DNMT3BQ9UBC3 AC136632.2-201ENST00000512891 861 ntBASIC18.49■□□□□ 0.55
DNMT3BQ9UBC3 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.49■□□□□ 0.55
DNMT3BQ9UBC3 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.49■□□□□ 0.55
DNMT3BQ9UBC3 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.49■□□□□ 0.55
DNMT3BQ9UBC3 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
DNMT3BQ9UBC3 MIR3687-2-201ENST00000577708 61 ntBASIC18.49■□□□□ 0.55
DNMT3BQ9UBC3 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.49■□□□□ 0.55
DNMT3BQ9UBC3 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.49■□□□□ 0.55
DNMT3BQ9UBC3 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.49■□□□□ 0.55
DNMT3BQ9UBC3 MIR3687-1-201ENST00000614492 61 ntBASIC18.49■□□□□ 0.55
DNMT3BQ9UBC3 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.49■□□□□ 0.55
DNMT3BQ9UBC3 AL353593.2-201ENST00000602529 1483 ntBASIC18.49■□□□□ 0.55
DNMT3BQ9UBC3 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DNMT3BQ9UBC3 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
DNMT3BQ9UBC3 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
DNMT3BQ9UBC3 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
DNMT3BQ9UBC3 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.49■□□□□ 0.55
DNMT3BQ9UBC3 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DNMT3BQ9UBC3 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DNMT3BQ9UBC3 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DNMT3BQ9UBC3 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DNMT3BQ9UBC3 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.49■□□□□ 0.55
DNMT3BQ9UBC3 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
DNMT3BQ9UBC3 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.48■□□□□ 0.55
DNMT3BQ9UBC3 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
DNMT3BQ9UBC3 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
DNMT3BQ9UBC3 AC120498.9-201ENST00000339021 3867 ntBASIC18.48■□□□□ 0.55
DNMT3BQ9UBC3 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
DNMT3BQ9UBC3 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms