Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NDE1Q9NXR1 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NDE1Q9NXR1 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
NDE1Q9NXR1 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NDE1Q9NXR1 NFIC-211ENST00000641145 8399 ntBASIC17.29■□□□□ 0.36
NDE1Q9NXR1 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
NDE1Q9NXR1 HLA-J-201ENST00000462773 1622 ntBASIC17.29■□□□□ 0.36
NDE1Q9NXR1 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
NDE1Q9NXR1 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NDE1Q9NXR1 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
NDE1Q9NXR1 FLJ38576-201ENST00000623820 2459 ntBASIC17.28■□□□□ 0.36
NDE1Q9NXR1 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.28■□□□□ 0.36
NDE1Q9NXR1 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NDE1Q9NXR1 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.28■□□□□ 0.36
NDE1Q9NXR1 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NDE1Q9NXR1 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NDE1Q9NXR1 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.28■□□□□ 0.36
NDE1Q9NXR1 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NDE1Q9NXR1 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
NDE1Q9NXR1 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NDE1Q9NXR1 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NDE1Q9NXR1 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
NDE1Q9NXR1 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.28■□□□□ 0.36
NDE1Q9NXR1 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NDE1Q9NXR1 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.28■□□□□ 0.36
NDE1Q9NXR1 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NDE1Q9NXR1 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.28■□□□□ 0.36
NDE1Q9NXR1 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.28■□□□□ 0.36
NDE1Q9NXR1 AC026271.3-201ENST00000571884 352 ntBASIC17.28■□□□□ 0.36
NDE1Q9NXR1 MTDHP1-201ENST00000605323 784 ntBASIC17.28■□□□□ 0.36
NDE1Q9NXR1 AC011298.2-201ENST00000617989 482 ntBASIC17.28■□□□□ 0.36
NDE1Q9NXR1 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.28■□□□□ 0.36
NDE1Q9NXR1 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NDE1Q9NXR1 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
NDE1Q9NXR1 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.28■□□□□ 0.36
NDE1Q9NXR1 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
NDE1Q9NXR1 PCDHA1-201ENST00000378133 2726 ntBASIC17.28■□□□□ 0.36
NDE1Q9NXR1 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.28■□□□□ 0.36
NDE1Q9NXR1 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NDE1Q9NXR1 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NDE1Q9NXR1 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
NDE1Q9NXR1 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.28■□□□□ 0.36
NDE1Q9NXR1 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
NDE1Q9NXR1 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
NDE1Q9NXR1 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
NDE1Q9NXR1 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
NDE1Q9NXR1 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
NDE1Q9NXR1 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.27■□□□□ 0.36
NDE1Q9NXR1 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
NDE1Q9NXR1 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NDE1Q9NXR1 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NDE1Q9NXR1 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.27■□□□□ 0.36
NDE1Q9NXR1 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
NDE1Q9NXR1 AL513477.1-201ENST00000602865 2407 ntBASIC17.27■□□□□ 0.36
NDE1Q9NXR1 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NDE1Q9NXR1 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.27■□□□□ 0.36
NDE1Q9NXR1 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NDE1Q9NXR1 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NDE1Q9NXR1 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NDE1Q9NXR1 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NDE1Q9NXR1 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
NDE1Q9NXR1 FAM207BP-201ENST00000447172 505 ntBASIC17.27■□□□□ 0.36
NDE1Q9NXR1 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.27■□□□□ 0.36
NDE1Q9NXR1 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.27■□□□□ 0.36
NDE1Q9NXR1 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.27■□□□□ 0.36
NDE1Q9NXR1 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.27■□□□□ 0.36
NDE1Q9NXR1 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
NDE1Q9NXR1 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
NDE1Q9NXR1 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NDE1Q9NXR1 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NDE1Q9NXR1 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
NDE1Q9NXR1 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
NDE1Q9NXR1 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.27■□□□□ 0.35
NDE1Q9NXR1 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.26■□□□□ 0.35
NDE1Q9NXR1 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NDE1Q9NXR1 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.26■□□□□ 0.35
NDE1Q9NXR1 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NDE1Q9NXR1 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.26■□□□□ 0.35
NDE1Q9NXR1 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
NDE1Q9NXR1 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NDE1Q9NXR1 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NDE1Q9NXR1 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.26■□□□□ 0.35
NDE1Q9NXR1 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NDE1Q9NXR1 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NDE1Q9NXR1 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NDE1Q9NXR1 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NDE1Q9NXR1 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NDE1Q9NXR1 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NDE1Q9NXR1 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NDE1Q9NXR1 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.26■□□□□ 0.35
NDE1Q9NXR1 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.26■□□□□ 0.35
NDE1Q9NXR1 AC026271.2-201ENST00000428091 497 ntBASIC17.26■□□□□ 0.35
NDE1Q9NXR1 KSR1P1-201ENST00000446298 240 ntBASIC17.26■□□□□ 0.35
NDE1Q9NXR1 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.26■□□□□ 0.35
NDE1Q9NXR1 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NDE1Q9NXR1 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.26■□□□□ 0.35
NDE1Q9NXR1 AC008622.2-201ENST00000617006 1229 ntBASIC17.26■□□□□ 0.35
NDE1Q9NXR1 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.26■□□□□ 0.35
NDE1Q9NXR1 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.26■□□□□ 0.35
NDE1Q9NXR1 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms