Protein–RNA interactions for Protein: Q9NUL5

RYDEN, Repressor of yield of DENV protein, humanhuman

Known RBP Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RYDENQ9NUL5 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RYDENQ9NUL5 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.35■□□□□ 0.21
RYDENQ9NUL5 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RYDENQ9NUL5 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RYDENQ9NUL5 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RYDENQ9NUL5 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RYDENQ9NUL5 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.35■□□□□ 0.21
RYDENQ9NUL5 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RYDENQ9NUL5 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.34■□□□□ 0.21
RYDENQ9NUL5 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
RYDENQ9NUL5 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
RYDENQ9NUL5 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
RYDENQ9NUL5 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RYDENQ9NUL5 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RYDENQ9NUL5 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RYDENQ9NUL5 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.34■□□□□ 0.21
RYDENQ9NUL5 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RYDENQ9NUL5 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
RYDENQ9NUL5 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RYDENQ9NUL5 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RYDENQ9NUL5 AC135776.1-201ENST00000319817 2481 ntBASIC16.34■□□□□ 0.21
RYDENQ9NUL5 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.34■□□□□ 0.21
RYDENQ9NUL5 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RYDENQ9NUL5 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RYDENQ9NUL5 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RYDENQ9NUL5 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RYDENQ9NUL5 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RYDENQ9NUL5 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.34■□□□□ 0.21
RYDENQ9NUL5 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
RYDENQ9NUL5 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.34■□□□□ 0.21
RYDENQ9NUL5 AC005104.2-201ENST00000427818 678 ntBASIC16.34■□□□□ 0.21
RYDENQ9NUL5 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.34■□□□□ 0.21
RYDENQ9NUL5 ABCD1P5-201ENST00000445663 754 ntBASIC16.34■□□□□ 0.21
RYDENQ9NUL5 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RYDENQ9NUL5 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
RYDENQ9NUL5 AC019227.1-201ENST00000526902 510 ntBASIC16.34■□□□□ 0.21
RYDENQ9NUL5 AC005520.3-201ENST00000602874 370 ntBASIC16.34■□□□□ 0.21
RYDENQ9NUL5 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RYDENQ9NUL5 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.34■□□□□ 0.21
RYDENQ9NUL5 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.34■□□□□ 0.21
RYDENQ9NUL5 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RYDENQ9NUL5 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
RYDENQ9NUL5 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RYDENQ9NUL5 BICD1-207ENST00000551848 1962 ntBASIC16.34■□□□□ 0.21
RYDENQ9NUL5 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
RYDENQ9NUL5 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.34■□□□□ 0.21
RYDENQ9NUL5 KRT8P47-201ENST00000604727 1398 ntBASIC16.34■□□□□ 0.21
RYDENQ9NUL5 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RYDENQ9NUL5 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RYDENQ9NUL5 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.34■□□□□ 0.21
RYDENQ9NUL5 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RYDENQ9NUL5 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RYDENQ9NUL5 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RYDENQ9NUL5 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.33■□□□□ 0.21
RYDENQ9NUL5 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
RYDENQ9NUL5 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RYDENQ9NUL5 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RYDENQ9NUL5 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
RYDENQ9NUL5 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.33■□□□□ 0.21
RYDENQ9NUL5 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RYDENQ9NUL5 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
RYDENQ9NUL5 AL020996.1-203ENST00000536896 2307 ntBASIC16.33■□□□□ 0.2
RYDENQ9NUL5 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.33■□□□□ 0.2
RYDENQ9NUL5 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RYDENQ9NUL5 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RYDENQ9NUL5 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
RYDENQ9NUL5 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RYDENQ9NUL5 RN7SKP199-201ENST00000410325 305 ntBASIC16.33■□□□□ 0.2
RYDENQ9NUL5 AC013410.2-201ENST00000422627 201 ntBASIC16.33■□□□□ 0.2
RYDENQ9NUL5 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.33■□□□□ 0.2
RYDENQ9NUL5 SCARNA2-201ENST00000458748 420 ntBASIC16.33■□□□□ 0.2
RYDENQ9NUL5 AC091607.1-201ENST00000490318 1060 ntBASIC16.33■□□□□ 0.2
RYDENQ9NUL5 RNU6-751P-201ENST00000516382 101 ntBASIC16.33■□□□□ 0.2
RYDENQ9NUL5 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.33■□□□□ 0.2
RYDENQ9NUL5 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.33■□□□□ 0.2
RYDENQ9NUL5 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RYDENQ9NUL5 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.33■□□□□ 0.2
RYDENQ9NUL5 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RYDENQ9NUL5 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RYDENQ9NUL5 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RYDENQ9NUL5 LMO3-212ENST00000535535 1488 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RYDENQ9NUL5 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RYDENQ9NUL5 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.33■□□□□ 0.2
RYDENQ9NUL5 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RYDENQ9NUL5 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.33■□□□□ 0.2
RYDENQ9NUL5 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RYDENQ9NUL5 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RYDENQ9NUL5 AC138028.4-201ENST00000564984 1845 ntBASIC16.33■□□□□ 0.2
RYDENQ9NUL5 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RYDENQ9NUL5 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RYDENQ9NUL5 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RYDENQ9NUL5 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.33■□□□□ 0.2
RYDENQ9NUL5 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RYDENQ9NUL5 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.33■□□□□ 0.2
RYDENQ9NUL5 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
RYDENQ9NUL5 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RYDENQ9NUL5 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RYDENQ9NUL5 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RYDENQ9NUL5 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RYDENQ9NUL5 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms