Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TM9SF3Q9HD45 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TM9SF3Q9HD45 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.82■□□□□ 0.44
TM9SF3Q9HD45 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
TM9SF3Q9HD45 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TM9SF3Q9HD45 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TM9SF3Q9HD45 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.82■□□□□ 0.44
TM9SF3Q9HD45 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TM9SF3Q9HD45 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.82■□□□□ 0.44
TM9SF3Q9HD45 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.82■□□□□ 0.44
TM9SF3Q9HD45 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TM9SF3Q9HD45 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TM9SF3Q9HD45 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TM9SF3Q9HD45 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.81■□□□□ 0.44
TM9SF3Q9HD45 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TM9SF3Q9HD45 MIR940-201ENST00000401276 94 ntBASIC17.81■□□□□ 0.44
TM9SF3Q9HD45 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TM9SF3Q9HD45 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.81■□□□□ 0.44
TM9SF3Q9HD45 AC021087.4-201ENST00000563761 564 ntBASIC17.81■□□□□ 0.44
TM9SF3Q9HD45 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.81■□□□□ 0.44
TM9SF3Q9HD45 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.81■□□□□ 0.44
TM9SF3Q9HD45 TERC-201ENST00000602385 541 ntBASIC17.81■□□□□ 0.44
TM9SF3Q9HD45 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TM9SF3Q9HD45 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TM9SF3Q9HD45 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.81■□□□□ 0.44
TM9SF3Q9HD45 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TM9SF3Q9HD45 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TM9SF3Q9HD45 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TM9SF3Q9HD45 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
TM9SF3Q9HD45 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
TM9SF3Q9HD45 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TM9SF3Q9HD45 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TM9SF3Q9HD45 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TM9SF3Q9HD45 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.8■□□□□ 0.44
TM9SF3Q9HD45 NOC2LP2-201ENST00000407594 1944 ntBASIC17.8■□□□□ 0.44
TM9SF3Q9HD45 ZNF259P1-201ENST00000407656 1365 ntBASIC17.8■□□□□ 0.44
TM9SF3Q9HD45 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.8■□□□□ 0.44
TM9SF3Q9HD45 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TM9SF3Q9HD45 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TM9SF3Q9HD45 PMS2P7-201ENST00000506558 1336 ntBASIC17.8■□□□□ 0.44
TM9SF3Q9HD45 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.8■□□□□ 0.44
TM9SF3Q9HD45 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.8■□□□□ 0.44
TM9SF3Q9HD45 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.8■□□□□ 0.44
TM9SF3Q9HD45 AC092865.5-201ENST00000545435 363 ntBASIC17.8■□□□□ 0.44
TM9SF3Q9HD45 SART3-203ENST00000546611 1184 ntBASIC17.8■□□□□ 0.44
TM9SF3Q9HD45 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.8■□□□□ 0.44
TM9SF3Q9HD45 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.8■□□□□ 0.44
TM9SF3Q9HD45 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TM9SF3Q9HD45 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.8■□□□□ 0.44
TM9SF3Q9HD45 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.8■□□□□ 0.44
TM9SF3Q9HD45 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TM9SF3Q9HD45 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TM9SF3Q9HD45 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TM9SF3Q9HD45 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TM9SF3Q9HD45 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TM9SF3Q9HD45 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TM9SF3Q9HD45 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TM9SF3Q9HD45 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.8■□□□□ 0.44
TM9SF3Q9HD45 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TM9SF3Q9HD45 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
TM9SF3Q9HD45 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
TM9SF3Q9HD45 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TM9SF3Q9HD45 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.79■□□□□ 0.44
TM9SF3Q9HD45 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TM9SF3Q9HD45 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
TM9SF3Q9HD45 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TM9SF3Q9HD45 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TM9SF3Q9HD45 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM9SF3Q9HD45 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TM9SF3Q9HD45 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM9SF3Q9HD45 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.79■□□□□ 0.44
TM9SF3Q9HD45 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM9SF3Q9HD45 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.79■□□□□ 0.44
TM9SF3Q9HD45 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TM9SF3Q9HD45 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.79■□□□□ 0.44
TM9SF3Q9HD45 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.79■□□□□ 0.44
TM9SF3Q9HD45 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.79■□□□□ 0.44
TM9SF3Q9HD45 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.79■□□□□ 0.44
TM9SF3Q9HD45 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.79■□□□□ 0.44
TM9SF3Q9HD45 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM9SF3Q9HD45 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
TM9SF3Q9HD45 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TM9SF3Q9HD45 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.79■□□□□ 0.44
TM9SF3Q9HD45 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.79■□□□□ 0.44
TM9SF3Q9HD45 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.79■□□□□ 0.44
TM9SF3Q9HD45 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.79■□□□□ 0.44
TM9SF3Q9HD45 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TM9SF3Q9HD45 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TM9SF3Q9HD45 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM9SF3Q9HD45 AL133373.2-201ENST00000623187 2828 ntBASIC17.79■□□□□ 0.44
TM9SF3Q9HD45 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM9SF3Q9HD45 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.78■□□□□ 0.44
TM9SF3Q9HD45 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TM9SF3Q9HD45 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.78■□□□□ 0.44
TM9SF3Q9HD45 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TM9SF3Q9HD45 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.78■□□□□ 0.44
TM9SF3Q9HD45 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.78■□□□□ 0.44
TM9SF3Q9HD45 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TM9SF3Q9HD45 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TM9SF3Q9HD45 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms