Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17■□□□□ 0.31
VCX3BQ9H321 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
VCX3BQ9H321 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
VCX3BQ9H321 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VCX3BQ9H321 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17■□□□□ 0.31
VCX3BQ9H321 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
VCX3BQ9H321 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17■□□□□ 0.31
VCX3BQ9H321 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
VCX3BQ9H321 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17■□□□□ 0.31
VCX3BQ9H321 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17■□□□□ 0.31
VCX3BQ9H321 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
VCX3BQ9H321 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
VCX3BQ9H321 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VCX3BQ9H321 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.99■□□□□ 0.31
VCX3BQ9H321 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.99■□□□□ 0.31
VCX3BQ9H321 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
VCX3BQ9H321 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VCX3BQ9H321 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VCX3BQ9H321 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.99■□□□□ 0.31
VCX3BQ9H321 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.99■□□□□ 0.31
VCX3BQ9H321 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VCX3BQ9H321 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VCX3BQ9H321 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC16.99■□□□□ 0.31
VCX3BQ9H321 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.99■□□□□ 0.31
VCX3BQ9H321 SUDS3P1-201ENST00000505831 966 ntBASIC16.99■□□□□ 0.31
VCX3BQ9H321 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC16.99■□□□□ 0.31
VCX3BQ9H321 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC16.99■□□□□ 0.31
VCX3BQ9H321 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC16.99■□□□□ 0.31
VCX3BQ9H321 OR10C1-204ENST00000622521 1039 ntBASIC16.99■□□□□ 0.31
VCX3BQ9H321 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VCX3BQ9H321 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VCX3BQ9H321 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
VCX3BQ9H321 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
VCX3BQ9H321 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.99■□□□□ 0.31
VCX3BQ9H321 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.99■□□□□ 0.31
VCX3BQ9H321 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VCX3BQ9H321 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VCX3BQ9H321 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.99■□□□□ 0.31
VCX3BQ9H321 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC16.98■□□□□ 0.31
VCX3BQ9H321 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VCX3BQ9H321 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
VCX3BQ9H321 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VCX3BQ9H321 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VCX3BQ9H321 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VCX3BQ9H321 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
VCX3BQ9H321 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
VCX3BQ9H321 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VCX3BQ9H321 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC16.98■□□□□ 0.31
VCX3BQ9H321 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VCX3BQ9H321 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VCX3BQ9H321 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC16.98■□□□□ 0.31
VCX3BQ9H321 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC16.98■□□□□ 0.31
VCX3BQ9H321 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC16.98■□□□□ 0.31
VCX3BQ9H321 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.98■□□□□ 0.31
VCX3BQ9H321 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC16.98■□□□□ 0.31
VCX3BQ9H321 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.98■□□□□ 0.31
VCX3BQ9H321 HLA-J-201ENST00000462773 1622 ntBASIC16.98■□□□□ 0.31
VCX3BQ9H321 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VCX3BQ9H321 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VCX3BQ9H321 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VCX3BQ9H321 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VCX3BQ9H321 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VCX3BQ9H321 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VCX3BQ9H321 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.98■□□□□ 0.31
VCX3BQ9H321 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VCX3BQ9H321 AC022188.1-201ENST00000620960 1664 ntBASIC16.97■□□□□ 0.31
VCX3BQ9H321 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VCX3BQ9H321 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VCX3BQ9H321 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VCX3BQ9H321 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.97■□□□□ 0.31
VCX3BQ9H321 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VCX3BQ9H321 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
VCX3BQ9H321 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VCX3BQ9H321 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
VCX3BQ9H321 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
VCX3BQ9H321 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
VCX3BQ9H321 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VCX3BQ9H321 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
VCX3BQ9H321 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
VCX3BQ9H321 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VCX3BQ9H321 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
VCX3BQ9H321 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VCX3BQ9H321 CNN2P6-201ENST00000439038 900 ntBASIC16.97■□□□□ 0.31
VCX3BQ9H321 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VCX3BQ9H321 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
VCX3BQ9H321 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
VCX3BQ9H321 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.97■□□□□ 0.31
VCX3BQ9H321 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
VCX3BQ9H321 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
VCX3BQ9H321 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VCX3BQ9H321 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VCX3BQ9H321 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
VCX3BQ9H321 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VCX3BQ9H321 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
VCX3BQ9H321 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VCX3BQ9H321 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VCX3BQ9H321 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
VCX3BQ9H321 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VCX3BQ9H321 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VCX3BQ9H321 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms