Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.64■□□□□ 0.41
LRFN3Q9BTN0 MIR6080-201ENST00000617359 66 ntBASIC17.64■□□□□ 0.41
LRFN3Q9BTN0 AC084121.4-201ENST00000641598 221 ntBASIC17.64■□□□□ 0.41
LRFN3Q9BTN0 AF228730.8-201ENST00000642140 221 ntBASIC17.64■□□□□ 0.41
LRFN3Q9BTN0 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRFN3Q9BTN0 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRFN3Q9BTN0 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRFN3Q9BTN0 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRFN3Q9BTN0 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRFN3Q9BTN0 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRFN3Q9BTN0 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRFN3Q9BTN0 AL391422.3-201ENST00000603791 2761 ntBASIC17.63■□□□□ 0.41
LRFN3Q9BTN0 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.63■□□□□ 0.41
LRFN3Q9BTN0 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRFN3Q9BTN0 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRFN3Q9BTN0 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRFN3Q9BTN0 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRFN3Q9BTN0 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
LRFN3Q9BTN0 AC022144.1-201ENST00000602255 1580 ntBASIC17.63■□□□□ 0.41
LRFN3Q9BTN0 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.63■□□□□ 0.41
LRFN3Q9BTN0 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRFN3Q9BTN0 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.63■□□□□ 0.41
LRFN3Q9BTN0 AL512384.1-201ENST00000406683 331 ntBASIC17.63■□□□□ 0.41
LRFN3Q9BTN0 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRFN3Q9BTN0 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.63■□□□□ 0.41
LRFN3Q9BTN0 AC132938.2-201ENST00000579188 680 ntBASIC17.63■□□□□ 0.41
LRFN3Q9BTN0 AL590560.3-201ENST00000623350 461 ntBASIC17.63■□□□□ 0.41
LRFN3Q9BTN0 AL591163.1-201ENST00000641757 987 ntBASIC17.63■□□□□ 0.41
LRFN3Q9BTN0 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
LRFN3Q9BTN0 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.63■□□□□ 0.41
LRFN3Q9BTN0 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LRFN3Q9BTN0 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRFN3Q9BTN0 KRT8P44-201ENST00000441609 1350 ntBASIC17.63■□□□□ 0.41
LRFN3Q9BTN0 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRFN3Q9BTN0 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRFN3Q9BTN0 AC132938.5-201ENST00000624980 1813 ntBASIC17.63■□□□□ 0.41
LRFN3Q9BTN0 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LRFN3Q9BTN0 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRFN3Q9BTN0 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRFN3Q9BTN0 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRFN3Q9BTN0 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRFN3Q9BTN0 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
LRFN3Q9BTN0 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.62■□□□□ 0.41
LRFN3Q9BTN0 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRFN3Q9BTN0 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRFN3Q9BTN0 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
LRFN3Q9BTN0 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.62■□□□□ 0.41
LRFN3Q9BTN0 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRFN3Q9BTN0 AL135744.1-201ENST00000565098 629 ntBASIC17.62■□□□□ 0.41
LRFN3Q9BTN0 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.62■□□□□ 0.41
LRFN3Q9BTN0 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.62■□□□□ 0.41
LRFN3Q9BTN0 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
LRFN3Q9BTN0 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
LRFN3Q9BTN0 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
LRFN3Q9BTN0 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
LRFN3Q9BTN0 PFAS-212ENST00000625942 396 ntTSL 5 BASIC17.62■□□□□ 0.41
LRFN3Q9BTN0 IRX1P1-201ENST00000438849 1838 ntBASIC17.62■□□□□ 0.41
LRFN3Q9BTN0 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRFN3Q9BTN0 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRFN3Q9BTN0 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRFN3Q9BTN0 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRFN3Q9BTN0 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRFN3Q9BTN0 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRFN3Q9BTN0 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRFN3Q9BTN0 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRFN3Q9BTN0 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.62■□□□□ 0.41
LRFN3Q9BTN0 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRFN3Q9BTN0 AC100757.3-201ENST00000622361 1406 ntBASIC17.62■□□□□ 0.41
LRFN3Q9BTN0 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
LRFN3Q9BTN0 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRFN3Q9BTN0 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
LRFN3Q9BTN0 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
LRFN3Q9BTN0 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
LRFN3Q9BTN0 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LRFN3Q9BTN0 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.61■□□□□ 0.41
LRFN3Q9BTN0 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LRFN3Q9BTN0 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRFN3Q9BTN0 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LRFN3Q9BTN0 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
LRFN3Q9BTN0 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.61■□□□□ 0.41
LRFN3Q9BTN0 TSSK5P-201ENST00000423978 907 ntBASIC17.61■□□□□ 0.41
LRFN3Q9BTN0 SPCS2P4-201ENST00000436160 681 ntBASIC17.61■□□□□ 0.41
LRFN3Q9BTN0 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.61■□□□□ 0.41
LRFN3Q9BTN0 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC17.61■□□□□ 0.41
LRFN3Q9BTN0 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.61■□□□□ 0.41
LRFN3Q9BTN0 POLE2-203ENST00000553805 496 ntTSL 2 BASIC17.61■□□□□ 0.41
LRFN3Q9BTN0 AC140912.1-201ENST00000577171 1054 ntBASIC17.61■□□□□ 0.41
LRFN3Q9BTN0 MIR4259-201ENST00000584466 101 ntBASIC17.61■□□□□ 0.41
LRFN3Q9BTN0 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.61■□□□□ 0.41
LRFN3Q9BTN0 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17.61■□□□□ 0.41
LRFN3Q9BTN0 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LRFN3Q9BTN0 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
LRFN3Q9BTN0 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRFN3Q9BTN0 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRFN3Q9BTN0 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRFN3Q9BTN0 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRFN3Q9BTN0 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRFN3Q9BTN0 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
LRFN3Q9BTN0 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRFN3Q9BTN0 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms